Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_3585 |
Symbol | |
ID | 6205622 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 4667978 |
End bp | 4668430 |
Gene Length | 453 bp |
Protein Length | 150 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641693253 |
Product | UspA domain-containing protein |
Protein accession | YP_001820462 |
Protein GI | 182415396 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.666006 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0498222 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATCGAA AGATCCTCGT AGCGCTCGAG AACAGCCGCG CCGACGACAC GCTGGTGCCG CACATCGCAC AGCTGGCGCA ACAGCTCGGC TCGGAGTTGT TGCTGGTGCA CGTGGCGGAT GGGTTTGCCG CGCGCAACTA CGAACAGCTG CATCTGGCGG AGTCCGATGA AATGCGCGCG GATCGGGCGT ATCTCGAAGG CGTGGCGGAA CGGCTGCGCG GCGGTGGACT GCGGGTGACG ACCCAGCTCG CACTGGGCAA TCCGCCGACG GAAATCCTGA AGACGGCGCT GGCGCAGCAA TGCGATCTGA TCGCGATGAC CTCGCACGGG CACAAGCTGA TCGGCGACAT CTTTCTGGGC AGCACGATCG AGCGCGTGCG GCACAACACC ACGGTGCCGA TCCTGGTGGT GCGCGCGGGC ACGGGTTCGG CGGCGCCGTT CGCCAAACCG TAA
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Protein sequence | MYRKILVALE NSRADDTLVP HIAQLAQQLG SELLLVHVAD GFAARNYEQL HLAESDEMRA DRAYLEGVAE RLRGGGLRVT TQLALGNPPT EILKTALAQQ CDLIAMTSHG HKLIGDIFLG STIERVRHNT TVPILVVRAG TGSAAPFAKP
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