Gene Oter_3585 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_3585 
Symbol 
ID6205622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp4667978 
End bp4668430 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content65% 
IMG OID641693253 
ProductUspA domain-containing protein 
Protein accessionYP_001820462 
Protein GI182415396 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.666006 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0498222 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCGAA AGATCCTCGT AGCGCTCGAG AACAGCCGCG CCGACGACAC GCTGGTGCCG 
CACATCGCAC AGCTGGCGCA ACAGCTCGGC TCGGAGTTGT TGCTGGTGCA CGTGGCGGAT
GGGTTTGCCG CGCGCAACTA CGAACAGCTG CATCTGGCGG AGTCCGATGA AATGCGCGCG
GATCGGGCGT ATCTCGAAGG CGTGGCGGAA CGGCTGCGCG GCGGTGGACT GCGGGTGACG
ACCCAGCTCG CACTGGGCAA TCCGCCGACG GAAATCCTGA AGACGGCGCT GGCGCAGCAA
TGCGATCTGA TCGCGATGAC CTCGCACGGG CACAAGCTGA TCGGCGACAT CTTTCTGGGC
AGCACGATCG AGCGCGTGCG GCACAACACC ACGGTGCCGA TCCTGGTGGT GCGCGCGGGC
ACGGGTTCGG CGGCGCCGTT CGCCAAACCG TAA
 
Protein sequence
MYRKILVALE NSRADDTLVP HIAQLAQQLG SELLLVHVAD GFAARNYEQL HLAESDEMRA 
DRAYLEGVAE RLRGGGLRVT TQLALGNPPT EILKTALAQQ CDLIAMTSHG HKLIGDIFLG
STIERVRHNT TVPILVVRAG TGSAAPFAKP