Gene Oter_3583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_3583 
Symbol 
ID6205715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp4664652 
End bp4665989 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content65% 
IMG OID641693251 
Productxanthine/uracil/vitamin C permease 
Protein accessionYP_001820460 
Protein GI182415394 
COG category[R] General function prediction only 
COG ID[COG2252] Permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.123209 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAACC GCTTCTTTCA ACTCGACGCG AACCGCACCA CGCTCGGCCG CGAACTTCAG 
GCCGGACTCA CGACGTTCGC GGCGATGGCC TACATCCTGG CGGTGAACCC GGCGATCCTC
TCTGCCACGG GCATGGACAA GCCCGCGCTC GTCACCGTCA CCGCGATCAC CGCCGCGCTC
GCGACGACGA TCATGGCGCT GCTCACCAAC TACCCGATCG CGCTCGCGCC GGGCATGGGG
ATCAACGCGT TTTTCACCTA CACGATCTGC CTCGCGAAGG GCGTGCCGTG GCCGGAGGCG
CTCGGCATGG TGTTCGTCAA CGGCGTGATC TTCCTCGTGC TGTCGGTCAC CGGCGTCCGC
GAGAAGATCA TCGCGGCGAT TCCGCACGCG CTGAAGATCG CGGTCACGTG CGGCATCGGA
CTCTTCATCG CTTTCATCGG ACTCAAGAAC GGAGGCGTGA TCGTCGCGAA TCCCGCCACG
TTCGTCTCGC ATGGCGACTT CGCCGCGCCA CCCGTCGCGC TCTGCCTTGG CGGCATCGTG
CTCACTGCGA TTCTCGTGTC GCGCCGCGTA CCCGGCGCGA TCGTGCTCAG CATCGCGATC
ATCACCTTGG CCGGATTACT CGTCCCCGAC GGTCAGGGCG GTGCGGTCAC GCGATGGCCG
GCGGATCTCG TCACCGCGCC GGCCTCGCCC GCGCCGGTGT TGCTCAAGCT GTCCTTCAAC
TTTCTCGCGA GCACCGATGC GCTCCTCGTG GCGCTCCCGC TGATCCTCAC GCTGCTGCTG
GTGGATATGT TCGACAACAT CGGCACGTTG ATTGGCGTCA CGAAGCGCGC GGGTTTTCTC
CGCCCTGACG GCACGCTGCC CAAAGCCGGC CGCGCCCTGA TCGCCGATTC GGTCGCCACG
CTCCTCAGCG CGCTCGCTGG AACCTCAACG GTCGTCAGCT ACATCGAGTC AGCCTCTGGA
GTCGAGGCGG GCGGTCGCAC CGGACTCACC ACGCTGACGA CCGCCGCGCT CATGCTGCTC
GCGCTGTTCT TCACGCCCCT GATTCTGATG GTGCCCGCCG TCGCTACGGC GCCCGCGCTC
GTGATCGTCG GCGTGTTCAT GATGCAGTCG GTGACCGAAA TCGAAATGCG CGACTTTGCG
ATCGCCGCTC CCGCCGTGCT GACGATTCTG GCGATTCCCT TTACGTTCAG CATCGCCGAA
GGCATCGGCC TGGGCCTGAT CGTTGCCGCC GTCCTCGCGC TGACCACCGG TCAGCCCAAG
AACATGACGC CCGTCGGCTA CGCCGTAGCC GCGGTGTTCT TCCTCCAATT TTTCCGCATC
TGGCCGTTCG GAGGGTAA
 
Protein sequence
MLNRFFQLDA NRTTLGRELQ AGLTTFAAMA YILAVNPAIL SATGMDKPAL VTVTAITAAL 
ATTIMALLTN YPIALAPGMG INAFFTYTIC LAKGVPWPEA LGMVFVNGVI FLVLSVTGVR
EKIIAAIPHA LKIAVTCGIG LFIAFIGLKN GGVIVANPAT FVSHGDFAAP PVALCLGGIV
LTAILVSRRV PGAIVLSIAI ITLAGLLVPD GQGGAVTRWP ADLVTAPASP APVLLKLSFN
FLASTDALLV ALPLILTLLL VDMFDNIGTL IGVTKRAGFL RPDGTLPKAG RALIADSVAT
LLSALAGTST VVSYIESASG VEAGGRTGLT TLTTAALMLL ALFFTPLILM VPAVATAPAL
VIVGVFMMQS VTEIEMRDFA IAAPAVLTIL AIPFTFSIAE GIGLGLIVAA VLALTTGQPK
NMTPVGYAVA AVFFLQFFRI WPFGG