| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3572 |
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| Symbol | |
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| ID | 6206524 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 4650074 |
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| End bp | 4651564 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641693240 |
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| Product | Mur ligase middle domain-containing protein |
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| Protein accession | YP_001820449 |
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| Protein GI | 182415383 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
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| TIGRFAM ID | [TIGR01081] UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0195246 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.705901 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAATCT ATTTCATGGG TGTTTGCGGC ACGGCGATGG GCAACGCGGC GCTGCTGGCG
CGCGCCGCCG GCCATGACGT GCTCGGCGCC GACGTCGACG TGTATCCGCC GATGAGCACG
GTGCTCGCGC AGTCGGGCAT CGCGCTGCAC GAGGGCTACG ATGCCGCCCG GCTCGAGCGG
CTCGCGCCAG ATCTCGTCGT GATCGGCAAT GCGATGTCGC GCGGCAATCC CGAGGTGGAG
TGGCTGCTGG ACACGCGCCG GTTCGCGTTC ACCTCGTTGC CGGCGGCGCT GCACAGCCTG
GTGCTGAACG TGCGGCGGAA CATCGTGGTC TGTGGCACGC ATGGCAAAAC GACCACCACC
GCGCTCACGG CCTACCTGCT GCGTGCGAAT GGCCGCGATC CCGGCTTCCT GATTGGCGGC
GTGCCGATCG ATCCGCCGAC GGGCAATCAC CTCGGCGCGG CGGCGGATCC GTTCGTGATC
GAGGGCGACG AGTACGACAG CGCGTTCTTC GACAAGCGCA GCAAGTTCAT CCACTACGCG
CCGCACATCG CGGTGTTGAA CAATCTCGAG TTCGATCACG CGGACATCTT CCGCGACCTG
GCGGATGTGC AGCGGACGTT CGTGCACCTG ACGCGGATCG TGCCGCGCAA CGGCTTTGTG
GTGCTCAATG GCGACGACGA GAACCTGCGC GCGCTCGGCG CGTTGCCGTG GACGAACGTG
GTGCGGGTCG GCACGGGCGA GCGCAACGAT CTGCGCATCG AAGCATTCCG CGAATCGGCC
GCGGGCGGCG AGTTTGGGTT GAGCTGGCAA GGACAGCCCT GGGCGGAAGT GCGCTGGCCG
CTGCCGGGGC TGTTCAACGC GCGCAACGCG GCGATGGCCG CGACGGCGGC GCAACTCGCG
CTGCTGCCCC GCGACGCGGC GCGGAGTGGA CGCGTGGGCG AGTTGTTCGC GAGCGCGGCC
GGCGCCGAGC GGCTGGATCT CGCCGCGCTG GCGCGTTTCC GCGGGGTGAA ACGGCGGCAG
GAAGTGTTGC TGGACACGCC GGCGCTGACG GTGATCGAGG ATTTCGGGCA TCATCCCACG
GCGCTGGCGG AAACGCTGCA CTCGTTTCGC GCGCGGTTTC CCGGCGCGAT CTTGACGGCG
GTGTTTGAGC CGCGGAGCAA CACGGCGCGC ACGAAGGCGC TGGAGGCGGC GTTCATGCGT
TCGCTGGCGC TCGCGGACGA AGTTTACCTC GGCGCGGTGA ATCGGGCGGA CAAGCTCGCG
GCGGGCGAGC GTTTCGACAC GGTGGCGGTG GCGCAACATC TCGAGCAGCT CGGAGTGAAG
GCGCACAGCG CGCCGACGAA TGCGGTGCTG CTCGAGAAAA TGCTCGCATA CAGCGGCGCG
CGCGCCGAGC GGCGGCGCGT GGTGGCGTTT TTCACCAACG GCTCGTTCGA TGGGATCATC
GGCAAATTCG TCGCGGCGAT GAGCGGATCG TCCTCGGACG CTGCGAGCTG A
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| Protein sequence | MRIYFMGVCG TAMGNAALLA RAAGHDVLGA DVDVYPPMST VLAQSGIALH EGYDAARLER
LAPDLVVIGN AMSRGNPEVE WLLDTRRFAF TSLPAALHSL VLNVRRNIVV CGTHGKTTTT
ALTAYLLRAN GRDPGFLIGG VPIDPPTGNH LGAAADPFVI EGDEYDSAFF DKRSKFIHYA
PHIAVLNNLE FDHADIFRDL ADVQRTFVHL TRIVPRNGFV VLNGDDENLR ALGALPWTNV
VRVGTGERND LRIEAFRESA AGGEFGLSWQ GQPWAEVRWP LPGLFNARNA AMAATAAQLA
LLPRDAARSG RVGELFASAA GAERLDLAAL ARFRGVKRRQ EVLLDTPALT VIEDFGHHPT
ALAETLHSFR ARFPGAILTA VFEPRSNTAR TKALEAAFMR SLALADEVYL GAVNRADKLA
AGERFDTVAV AQHLEQLGVK AHSAPTNAVL LEKMLAYSGA RAERRRVVAF FTNGSFDGII
GKFVAAMSGS SSDAAS
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