Gene Oter_3561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_3561 
Symbol 
ID6204984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp4637122 
End bp4637898 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content68% 
IMG OID641693229 
ProductABC transporter related 
Protein accessionYP_001820438 
Protein GI182415372 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.135479 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.934019 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCGAT CGCCGCTGGT CGAGTTTCAA GAGGTTACCA AACGTTTCGG CGACGGCCCG 
GCCGTGCTGG AGCAGATTTC GCTCACCGCG GCCGCCGGCG ACTTCATCGG CCTGATCGGC
CCCAGCGGCT GCGGGAAATC CACGCTACTG CGCCTGATCG CGGGCCTTAG TCCAATCACT
CATGGCTCGC TGACCATCGG CGGCCGCTCC CCGGAAGCCG CCGCGGCTGA TCTGGCGTTT
GTCTTTCAAG AATCGACGCT CCTGCCCTGG CTCAACGTCG CGAAAAACGT CGAAGCGCCG
CTCCGACTGC GCCGCATTCC CGGCGGCCAG CGCGTCGCCA CCCGCCAGCG CGTACTCGAG
CTCGTGGGGC TCGGCGATCG CGGCCCCGCC TACCCGCGAC AACTCTCGGG CGGGCAGAAG
ATGCGCGTGT CGATCGCCCG CGCCCTGGCC CTCGCGCCCC GGCTGCTGCT GCTCGACGAA
CCGTTCGGCG CGCTGGACGA AATGACGCGC GAGCGGCTCA ACGAGGAATT GCTCGCCATT
CGCGAGCAGC AGGCGTGGAC GGCGTTTTTC GTCACGCACT CCGTCGCCGA GGCGGTGTTC
CTCTCGAACC GGATCGTCGT GCTGTCCAGT GCACCCGGCC GGATCGCCGC CGAGGTGCCC
GTCGACCTCC CTTATCCCCG CACCGCCGAA ACGCGGCTGT CGCGCGCTTA TCACGATCTC
GTCACCGAGG TCTCCCGCGT GCTCCGCCAA GCAGAATCTC CGCGCCCGGT CGCCTGA
 
Protein sequence
MERSPLVEFQ EVTKRFGDGP AVLEQISLTA AAGDFIGLIG PSGCGKSTLL RLIAGLSPIT 
HGSLTIGGRS PEAAAADLAF VFQESTLLPW LNVAKNVEAP LRLRRIPGGQ RVATRQRVLE
LVGLGDRGPA YPRQLSGGQK MRVSIARALA LAPRLLLLDE PFGALDEMTR ERLNEELLAI
REQQAWTAFF VTHSVAEAVF LSNRIVVLSS APGRIAAEVP VDLPYPRTAE TRLSRAYHDL
VTEVSRVLRQ AESPRPVA