Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_3560 |
Symbol | |
ID | 6206862 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 4634694 |
End bp | 4636832 |
Gene Length | 2139 bp |
Protein Length | 712 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641693228 |
Product | multi-sensor hybrid histidine kinase |
Protein accession | YP_001820437 |
Protein GI | 182415371 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.348943 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGATCT ACCCTCACGG TTTCGCGTTG CGGACAACGT TGGTCTACGC GGCGGCGGCG GCGCTCTGGA TCACGTTTTC AGATTGGGCG GTGTTGCTCC TCGTGCAGGA TGTCCCTGCG GCGGCCCGGC TCTCGATTTA CAAAGGTTGG GCCTTCGTGG CGGTGACGTC ACTGCTGCTC TACGGCGTGC TGCAGCAGTG GATGGCGCGG CTGAAGCGGC AGCTGGACGA GCAGGCGAAG ATCGAGGTCG AGCTGCGGCA GTGGGCGGAT GCGTTCAACC ATTGCGCGCA CGGCATCGCG ATCGGCATTC CGGCCACGAA TCGTTTGTTG GCCTGCAACC CCGCGTTTGC CGCGATGCAC GGCTTCACTG TCGCCGAGAT GAATGGCCGG GACGTGTTGA CCCTCTATGT GCCGAGCGAT TGGGAACACG TGCGGCGCAA TGTGGCGATC GCCGACCGTG ACGGACGCGT GCAATTCCAG GCGAACAGGG TGCGCAAGGA CGGCTCGGTC TTCACGGTGC AGGTCGACCT GGTCTCGGTC CGCGACGCGA ACGAAGCACT GCTTTACCGC GTGACCACCG TGCAGGACGT GACCGAGCGC AACCGGGCGG AGGCACAACG GAGGGAGAGC GAGGATCGGT TCCGCGCGGT GGTCGAGAAC ATCCACGAGG TGTTTTGGAT TCACGACCCC AGCCATATCC GGATCGTCTA TGTGAGTCCG GCCTTCGAAA AGATCTGGGG GCGGCCGTGC GCGGAGGTGG TAAACTGGGA TTCGGAGACG TGGCTCCAGA CGCTGCACGC GGACGACCGC GAGCGGTTGC GCCGCGTCGT GCAGGGGGGG ACCCCTGAGG GCTACGACGA GCAATATCGA ATTTTGCGGC CGGACGGCAC GGAACGCTGG GTGCACGACC GGTCGTTCCC GGTCAAGGAC GGCGCCGGGC GCGTGGTGCG GATCGTCGGG GTGGCCCAGG ACATTACCGA ACGCAAACAG CTCGAGTCGC AGTTTCTGCG GGCGCAGCGG CTCGAGGCGA TCGGCACGCT GGCCGGCGGC GTGGCGCACG ATTTGAACAA CATTCTCGCG CCGATGCTGA TGGCCGCCGG GCTGTTGAAG GAAAACATCA CCAACGAGCA CGATCGCGAA ATGCTCTCGA TGGTGGAGCG CAGCGCGCGG CGCGGCGCCG ACATCATCCG GCAGTTGCTG ACCTTCAGCC GTGGCGTCGA AGGCTCGCGG CTTGCCCTGC AGATCCGGCA TCTCGTGCGG GAGATGATGG GGATCATGCG CGAGACGTTC CCGCGCGAGA TCACGCTGAT CGATCAGACC AAGGGCGAGC TCTGGCCGGT GGTCGCCGAT GCGACCCAAC TGCACCAGGT GTTGGTGAAC CTCTGCGTGA ATGCACGCGA CGCCATGCCG CACGGCGGGA CGCTCGCGAT CAGCGCGGTG AACGTCGAAT TCGTGGCGGG CGATGCGCAG TTGCCGCATG ACGCCCCGCC AGGCTCTTAC GTGATGCTGT CGGTGAAGGA CACCGGCGTC GGCATGACCC CGGAGATCAT GGAGCGAATC TTCGATCCGT TCTTCACGAC GAAGGACCTG GGCCGCGGCA CGGGGCTGGG GCTTTCGACC GTGCTCGGAA TCGTGCGCAG CCACGGCGGG TTTGTGAACG TGTCGAGCGA GGCGGGGAAG GGCAGCGACT TCCGCGTCTA CCTGCCCGCG TCGCGGGCCG AGGTGGCGGA ACCCGCGGCC GAACCGGCTG AGCCGTTGCC GCTGGGCCAC GGCGAGCTGA TCCTAGTGGT CGATGACGAG GAGCCGATTC GCGATGCCAC CCGGCACGTG CTGGTGAAAC AGAACTATCG CGTCGTGACG GCGACGGACG GCAAGGAAGC GGTGACGGCT TTTCTGGATC AGCGCGACAA CGTGCAGTTG CTGCTGACCG ACATGATGAT GCCCCAGATG GGGGGCGCGG CGCTGATTCG GGCGCTGCGG TTGCTCAATC CGCAGCTCAA AGTCATCGCC ACCAGCGGGC TGGATTCCCA CGCGGGTGAC GGCGAGCTGG CTGAGCTCGG GCTCAGCGAC ATCCTGCCGA AACCATGCGG ACCGAAGGCG TTGATCGAGT CGATCCAACG GGCATTGATG AGAAACTGA
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Protein sequence | MRIYPHGFAL RTTLVYAAAA ALWITFSDWA VLLLVQDVPA AARLSIYKGW AFVAVTSLLL YGVLQQWMAR LKRQLDEQAK IEVELRQWAD AFNHCAHGIA IGIPATNRLL ACNPAFAAMH GFTVAEMNGR DVLTLYVPSD WEHVRRNVAI ADRDGRVQFQ ANRVRKDGSV FTVQVDLVSV RDANEALLYR VTTVQDVTER NRAEAQRRES EDRFRAVVEN IHEVFWIHDP SHIRIVYVSP AFEKIWGRPC AEVVNWDSET WLQTLHADDR ERLRRVVQGG TPEGYDEQYR ILRPDGTERW VHDRSFPVKD GAGRVVRIVG VAQDITERKQ LESQFLRAQR LEAIGTLAGG VAHDLNNILA PMLMAAGLLK ENITNEHDRE MLSMVERSAR RGADIIRQLL TFSRGVEGSR LALQIRHLVR EMMGIMRETF PREITLIDQT KGELWPVVAD ATQLHQVLVN LCVNARDAMP HGGTLAISAV NVEFVAGDAQ LPHDAPPGSY VMLSVKDTGV GMTPEIMERI FDPFFTTKDL GRGTGLGLST VLGIVRSHGG FVNVSSEAGK GSDFRVYLPA SRAEVAEPAA EPAEPLPLGH GELILVVDDE EPIRDATRHV LVKQNYRVVT ATDGKEAVTA FLDQRDNVQL LLTDMMMPQM GGAALIRALR LLNPQLKVIA TSGLDSHAGD GELAELGLSD ILPKPCGPKA LIESIQRALM RN
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