Gene Oter_3544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_3544 
Symbol 
ID6205185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp4614773 
End bp4616239 
Gene Length1467 bp 
Protein Length488 aa 
Translation table11 
GC content66% 
IMG OID641693212 
Productcytochrome b/b6 domain-containing protein 
Protein accessionYP_001820421 
Protein GI182415355 
COG category[C] Energy production and conversion 
COG ID[COG1290] Cytochrome b subunit of the bc complex 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.148449 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGGA GGATCGTCTC GATTTGGGAT TGGCTCGATG ACCGGCTTGG ACTGAGCGCG 
CTGTTCGGGC CGTCGCTCAA GCACCTCGTG CCGCACGACG CGCGGTGGTG GTATGTGTTC
GGCAGCGCCA CGCTCGCGGC GTTCATTGTC CAGATCATCA CCGGCGTGGC GCTCGCGTTT
TCCTACGTGC CCTCGTCGGC CGAGGCCTAC GAGTCGCTGC GATTCATCAC CGACGAAGCG
CCACTCGGCT CGTTCATGCG CGGGCTGCAC TATTTCGGCG CCTCCGCGAT GGTGCTGATG
ATCGGCGCGC ACATGGCACA GACGTTTCTG TTTGGCGCCT ACAAATATCC GCGCGAGATG
AGTTGGAGCA CCGGCGTGCT GCTCCTCGGA TTCACGCTGG TCATGGGGTT CACCGGCCAG
CTGTTGCGTT GGGATCAGAC CGCGGCGTGG TCGGTCGTCG TCGCCGCCGA GCAGGCCGGC
CGCGTGCCGT TCATCGGCAA CTGGCTCGCG ACCTTCATCC TCGGCGGATC GACGCTCGGC
GGCGCCACGC TCAGCCGGTT CTTCGCGATC CACGTGTTCC TGATTCCAGG AATCATGTTC
GCATTCATCG GGCTGCACCT CTGGCTCGTG CTGCGTCACG GCATCTCGGA ACCGCCCAAG
CCCGGCCGGC CGGTCAACCC TGCGACCTAC CGGCAGGAAT ATCATGCCGA GCTCGAGCGC
ACCGGCGTGC CGTTCTGGCC GGACGGCGCC TGGCGCGATT TCGTTTTCGG CGCGGCGATG
ATTGTCGTCA TCGCGGTGCT CGCGATCGTG TTTGGACCAC CGCCGATCGA GAATCCACCC
GACCCGTCGA TCCTTCAAGC CGACCCTCGG CCAGACTGGT ATCTGCTCTG GTATTTCGCC
GTGCTGGCGC TCATCCCCGA GAGCATGGAG GGCATCGTGA TGATCCTCGC GCCCGCGCTG
ATCGGAATCA TCCTGCTGCT CGCCCCCATC CTCGGCCACA AGGGCGAGCG CCACTGGTCG
CGCCGCCCTT GGTCGATCGC CGTCGTGCTG TTCAGCGTGC TCATGATCGG TTCGCTCTGG
ATTGTCGGCA AACAGTCACC CTGGTCGCCG AATTTCGAAG CCAAACCGCT GCCCGCCTCC
GTCGTCCGCA GCGAGGATCC GCTCGTCGTT GACGGCGCCC GCGTTTTCCA CGACCGCGCG
TGTCTCAACT GCCACCTCGT GGAGGGACAC GGCGGCCGCC GCGGCCCCGA CCTCACGCTC
GTGGGCGATC GACTAAAGGA AACCGACGTG ATCATCCGGA TCGTCAACGG CGGCCGAAAC
ATGCCGGCCT ACGGCACGAT CCTGCGACCC GACGAAGTGC ACGCGCTCAC CGCGTTCCTG
CTCACGCGTA ACCGGGCGAA CGTTCCTCGC GAACACGAGC CCGCTCGACA CGACCGCGGC
CCCGCGGCTG GCCAGCCGGG ACAGTAA
 
Protein sequence
MKRRIVSIWD WLDDRLGLSA LFGPSLKHLV PHDARWWYVF GSATLAAFIV QIITGVALAF 
SYVPSSAEAY ESLRFITDEA PLGSFMRGLH YFGASAMVLM IGAHMAQTFL FGAYKYPREM
SWSTGVLLLG FTLVMGFTGQ LLRWDQTAAW SVVVAAEQAG RVPFIGNWLA TFILGGSTLG
GATLSRFFAI HVFLIPGIMF AFIGLHLWLV LRHGISEPPK PGRPVNPATY RQEYHAELER
TGVPFWPDGA WRDFVFGAAM IVVIAVLAIV FGPPPIENPP DPSILQADPR PDWYLLWYFA
VLALIPESME GIVMILAPAL IGIILLLAPI LGHKGERHWS RRPWSIAVVL FSVLMIGSLW
IVGKQSPWSP NFEAKPLPAS VVRSEDPLVV DGARVFHDRA CLNCHLVEGH GGRRGPDLTL
VGDRLKETDV IIRIVNGGRN MPAYGTILRP DEVHALTAFL LTRNRANVPR EHEPARHDRG
PAAGQPGQ