Gene Oter_3536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_3536 
Symbol 
ID6205716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp4606121 
End bp4606933 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content62% 
IMG OID641693204 
Producthypothetical protein 
Protein accessionYP_001820413 
Protein GI182415347 
COG category[R] General function prediction only 
COG ID[COG4587] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.158906 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCTCCG CTCTCGCCAA ATACCGCCAC TCGTTCCTCG TCGGGCTGCA GAGCAATCTG 
GTGTATCGCT GGAATTTCGC GATCCGCGGG TTCTTCTCCC TCTTCCATCT CGCGGCCGTG
GTCATCCTCT GGACCGCCGC CTACGCCGGT CGCGACACCA TCGGTGGCTA TACGCTCGGT
CAGACGATCA CGTATTTCAT CATGCTGATC GTGCTGCAGT TTTTCGTCAG CGCGTTCAAC
GAGGACTATC AGATCAGCGA GGAAATCCGC AACGGCCTCA TCAATCAGTT CCTGCTCAAG
CCGATCAATT ACTACGCCTA TCGGTTTTCG ATTTTCCTCG CCGCGCGGCT GGTGTCCGGA
CTGCTCGTGC TCCTGCCGCT GGCGCTGGCG GCTCCTCTGC TGTACGAGCA TCTCAGTTTT
CCCGACGGCG CGTGGCGGAT CGCACTCGGC CTGCCAGCGG TGCTCGTCGC GGCGCTGGTC
CAATTCAGCA TCGCGTTCGC CTTCGGCATG CTGACGTTCT GGTTTCTCGA GATCCAGGGC
TTCGTGATCC TCTCCTACGC GGTCGAGACG CTGCTCAGCG GCCAGGTCTT TCCGCTCGAT
TTGCTCCCGC CCGGCGTGCT CCGCGTCGCG GAGTTTCTGC CGTTTTACTA CCAAATGTAT
TTCCCGGCGG CGATCCTCAC CGGGCGCATC GACGATCCGG TGTTTGCCGT GCAGCACCTT
GCCATCGGTG TCGGCTGGGT CGTGCTGCTG CTCTCATTCA ACCGGCTGCT GTGGGTCCGC
GGACTCCGAC GCCACACCGC CGTCGGCGGC TGA
 
Protein sequence
MFSALAKYRH SFLVGLQSNL VYRWNFAIRG FFSLFHLAAV VILWTAAYAG RDTIGGYTLG 
QTITYFIMLI VLQFFVSAFN EDYQISEEIR NGLINQFLLK PINYYAYRFS IFLAARLVSG
LLVLLPLALA APLLYEHLSF PDGAWRIALG LPAVLVAALV QFSIAFAFGM LTFWFLEIQG
FVILSYAVET LLSGQVFPLD LLPPGVLRVA EFLPFYYQMY FPAAILTGRI DDPVFAVQHL
AIGVGWVVLL LSFNRLLWVR GLRRHTAVGG