Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_3536 |
Symbol | |
ID | 6205716 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 4606121 |
End bp | 4606933 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641693204 |
Product | hypothetical protein |
Protein accession | YP_001820413 |
Protein GI | 182415347 |
COG category | [R] General function prediction only |
COG ID | [COG4587] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.158906 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCTCCG CTCTCGCCAA ATACCGCCAC TCGTTCCTCG TCGGGCTGCA GAGCAATCTG GTGTATCGCT GGAATTTCGC GATCCGCGGG TTCTTCTCCC TCTTCCATCT CGCGGCCGTG GTCATCCTCT GGACCGCCGC CTACGCCGGT CGCGACACCA TCGGTGGCTA TACGCTCGGT CAGACGATCA CGTATTTCAT CATGCTGATC GTGCTGCAGT TTTTCGTCAG CGCGTTCAAC GAGGACTATC AGATCAGCGA GGAAATCCGC AACGGCCTCA TCAATCAGTT CCTGCTCAAG CCGATCAATT ACTACGCCTA TCGGTTTTCG ATTTTCCTCG CCGCGCGGCT GGTGTCCGGA CTGCTCGTGC TCCTGCCGCT GGCGCTGGCG GCTCCTCTGC TGTACGAGCA TCTCAGTTTT CCCGACGGCG CGTGGCGGAT CGCACTCGGC CTGCCAGCGG TGCTCGTCGC GGCGCTGGTC CAATTCAGCA TCGCGTTCGC CTTCGGCATG CTGACGTTCT GGTTTCTCGA GATCCAGGGC TTCGTGATCC TCTCCTACGC GGTCGAGACG CTGCTCAGCG GCCAGGTCTT TCCGCTCGAT TTGCTCCCGC CCGGCGTGCT CCGCGTCGCG GAGTTTCTGC CGTTTTACTA CCAAATGTAT TTCCCGGCGG CGATCCTCAC CGGGCGCATC GACGATCCGG TGTTTGCCGT GCAGCACCTT GCCATCGGTG TCGGCTGGGT CGTGCTGCTG CTCTCATTCA ACCGGCTGCT GTGGGTCCGC GGACTCCGAC GCCACACCGC CGTCGGCGGC TGA
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Protein sequence | MFSALAKYRH SFLVGLQSNL VYRWNFAIRG FFSLFHLAAV VILWTAAYAG RDTIGGYTLG QTITYFIMLI VLQFFVSAFN EDYQISEEIR NGLINQFLLK PINYYAYRFS IFLAARLVSG LLVLLPLALA APLLYEHLSF PDGAWRIALG LPAVLVAALV QFSIAFAFGM LTFWFLEIQG FVILSYAVET LLSGQVFPLD LLPPGVLRVA EFLPFYYQMY FPAAILTGRI DDPVFAVQHL AIGVGWVVLL LSFNRLLWVR GLRRHTAVGG
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