| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3531 |
|---|
| Symbol | |
|---|
| ID | 6207840 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 4594089 |
|---|
| End bp | 4595222 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641693198 |
|---|
| Product | UBA/THIF-type NAD/FAD binding protein |
|---|
| Protein accession | YP_001820408 |
|---|
| Protein GI | 182415342 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2
[COG0607] Rhodanese-related sulfurtransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.522613 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGAAT CACTGCCTGA ACTCTCGCCC GCCGAGCTGG CGCGTTATTC CCGGCACCTC
CTGCTCGAGC AGGTCGGCCT CGCGGGTCAG CGCCGGATCG CCGCCGCGCG CGTGCTGGTG
ATCGGCGCCG GCGGCCTGGG CAGCCCCGCC GGCTTGTATC TCGCCGCCGC GGGCATCGGC
ACGCTCGGCA TCGCCGACCT CGATCGTGTG GAGGCGCACA ACCTTCAACG CCAGCTGCTG
CATGACACCG CCAGCGTCGG CGAACCCAAG GTCTCCTCCG CCGCCCGGCG ATTGCGCGGG
TTGAACCCCC ACGTGCGCGT CGTGGAGCAT GCATCGGGCG TGACCACCGA AAATGCGCCC
GGGCTTTTCG CCAACTACGA CGTGATCGTC GATGGCACCG ACAATTTCGA CGCGCGTTAT
ATGAACAACG ACGCGGCGTT CCACGCCGGG AAGCCGCTGG TGTTCGGGAG CGTCTTCAAA
TTCGAGGGGC AGGTCGCGGT ATTCGATCCG GCGCACGACG GCCCATGCTA TCGCTGTCTT
TTCCCCGAGC CGCCAGCCAG CGGCAGTGTG CCGGGCTGCG GCGAAGCCGG AGTGCTGGGC
GCGCTCTGTG GAGTCATCGG CAGCCTGCAA GCGCTCGAAA CGATCAAGCT GGTGACCGGC
GTGGGCGCTC CGCTCCGGGG CAAGCTGCTC ACTTACGATG CGCTCACGCA AACGTTCCAA
ACCTTGGCGC TAGCCAGGAA TCCGTCGTGT CCACTCTGTG GCGACGGCGC GATCGCCCCG
GCCGCGCAAC TGCCGCCTCG CGCTCCCGAC GCGCCGCGCG AGATTTCCGC CGCCGAGGCG
CGGCACCGCC TCGATACCAC GCCGGAGCAA ACGCTGCTGC TCGACGTGCG CGAGCCGTGG
GAGACCGAGA TCGTGCGCAT CGCGGGCGCG GAACATATTC CGATGCGACA GGTGCCGGCC
CGGCTCAGCA CGTTGCCGAA GGACCGCGAT CTGCTGGTGC TCTGTCATCA CGGCAGCCGC
AGTCGCCAAG TGAGCGAGTT TCTCCGCGCG CAGGGATTTC CCCGCGCCAT CAACGTCGCC
GGCGGCATCG CCGCGTGGAC CGACGAAGTC GACCCCTCGC TCGTCCGCTA TTGA
|
|---|
| Protein sequence | MPESLPELSP AELARYSRHL LLEQVGLAGQ RRIAAARVLV IGAGGLGSPA GLYLAAAGIG
TLGIADLDRV EAHNLQRQLL HDTASVGEPK VSSAARRLRG LNPHVRVVEH ASGVTTENAP
GLFANYDVIV DGTDNFDARY MNNDAAFHAG KPLVFGSVFK FEGQVAVFDP AHDGPCYRCL
FPEPPASGSV PGCGEAGVLG ALCGVIGSLQ ALETIKLVTG VGAPLRGKLL TYDALTQTFQ
TLALARNPSC PLCGDGAIAP AAQLPPRAPD APREISAAEA RHRLDTTPEQ TLLLDVREPW
ETEIVRIAGA EHIPMRQVPA RLSTLPKDRD LLVLCHHGSR SRQVSEFLRA QGFPRAINVA
GGIAAWTDEV DPSLVRY
|
|---|
| |