| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3518 |
|---|
| Symbol | |
|---|
| ID | 6208645 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 4580501 |
|---|
| End bp | 4581862 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641693185 |
|---|
| Product | threonine synthase |
|---|
| Protein accession | YP_001820395 |
|---|
| Protein GI | 182415329 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0498] Threonine synthase |
|---|
| TIGRFAM ID | [TIGR00260] threonine synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.116965 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGCGCT TTCTCTCGAC CCGAGGACAG ACCCAGCCGC TGCGATTTTC CGAGGCCGTG
GCCACCGGAC TCGCGCCGGA CGGCGGCCTG TATCTGCCCG AAACACTGCC GGACCTTTCC
GGTGAGTTGA ACCGCTTCGA GGGGCTGGGC TACGCCGACC TCTGCTTCGA GTTCCTGCGC
ATCTTCGCCA CGGATATCGA GCCGGGGACG TTGCGCGCGA TCGTCCAGAA ATCCTACACC
AAGTTCTCGC ATCCGGAGAT CGCGCCGCTG AAACAGCTCG CGCCGAATCT CCACGTGCTC
GAGCTGTTCC ACGGCCCGAC GCTCGCGTTC AAGGATTTTG CCCTCCAGCT GCTGGGTAAT
CTCTACGAGC ACCAGTGCGC GGTGCGGCAC GAATCGATCA ACGTGCTTGG CGCCACGTCG
GGCGACACCG GCGCGGCGGC GATCCACGGT CTGTTGGGCA AACCGGGTAC CGCCATCTTC
ATCCTGTATC CGAATGGCCG CGTCTCGCCA CTGCAGGAGC GGCAGATGGC CTGCACCGGC
GCGAGCAATG TGTTCGCGCT CGCGGTGGAT GGCACGTTCG ATGACGCGCA GTCGGCGTTG
AAGGAGATCT TCGGCGACCA GCGGTTCCGC ACGGGCCACC GGCTCTCCGC GGTGAACTCG
ATCAACCTCG CGCGCGTGCT GGCGCAATGC GTGTACTACC TGCACGCGTG GCTGAAGCTG
CCGGCGGGCG ATCGCGGCAA CGTCGAGTTC GTCGTGCCGA CGGGCAATTT CGGCAACGTG
CTCGCGGGCT GGCTGCTCCA GCAGATGGGC GTGCCGATCC GCGGCTTCAA GGTCGCGACG
AACCAGAACG ACATTCTCTA CCGGCTGTTC ACGACCGGCG AATACCGGCT CGGCGACGTG
CACCCGAGTC TGGCGCCATC GATGGACATC CAGGTCGCGT CGAACTTCGA GCGCTTCCTT
TACTTCAGTC TGGGCCGGGA CGCGACGCGG TTGCGCGAGG TGATGCAGAC GTTCAAGACC
ACCGGGGTCT ATCGGTTTGA AAACTTCGAT CGCGGCACCT TCTCCGCCTC GCGCTGCACT
GACGCGGAGA TTCCCGGAAT CATCGCGCGG GTGCATCGCG ACTACGGCTA CGTGGCGGAT
CCGCACACGG CGTGCGCGTT CAAGGAGCAC AACCCCGACC GCGTGAGCAT CGTGCTCTCG
ACGGCGAGCC CGGCGAAGTT TCCGGAAACG ATTCGCAAAG CGATCAAGGT TGAGCCGACG
CACCCGACGC TCGAAGCGCT GAAGTCCGTG CCGATCGTGA AGCACGAGTT GCCCGCCACG
CCGGCGGCGA TCCGGGCGTT CATCGACGCA CACGCGGTGT AG
|
|---|
| Protein sequence | MMRFLSTRGQ TQPLRFSEAV ATGLAPDGGL YLPETLPDLS GELNRFEGLG YADLCFEFLR
IFATDIEPGT LRAIVQKSYT KFSHPEIAPL KQLAPNLHVL ELFHGPTLAF KDFALQLLGN
LYEHQCAVRH ESINVLGATS GDTGAAAIHG LLGKPGTAIF ILYPNGRVSP LQERQMACTG
ASNVFALAVD GTFDDAQSAL KEIFGDQRFR TGHRLSAVNS INLARVLAQC VYYLHAWLKL
PAGDRGNVEF VVPTGNFGNV LAGWLLQQMG VPIRGFKVAT NQNDILYRLF TTGEYRLGDV
HPSLAPSMDI QVASNFERFL YFSLGRDATR LREVMQTFKT TGVYRFENFD RGTFSASRCT
DAEIPGIIAR VHRDYGYVAD PHTACAFKEH NPDRVSIVLS TASPAKFPET IRKAIKVEPT
HPTLEALKSV PIVKHELPAT PAAIRAFIDA HAV
|
|---|
| |