| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3516 |
|---|
| Symbol | |
|---|
| ID | 6208447 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 4578240 |
|---|
| End bp | 4578932 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641693183 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_001820393 |
|---|
| Protein GI | 182415327 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0383894 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.869629 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCCGC GCTTCTCGCT CGTCGTTCCG CTCTACAACG AAGCCGGCAA TGTCCTGCCG
CTTCTTGCCG CCGCAAACGA CGTGCTCGCG ACTTTCCGCG GTGGTCACGA AATCATCCTG
GTCGACGACG GCAGCACCGA CGCGACGCCC GCCGACATCG CCGCCGCCTG CGCGCGGTGG
CCGACGGTGC GCTCGATCCG ACACCCACAG AACCAGGGGC AAGCCGCCGC GTTGCTCACC
GGCCTGCACG CCGCACGCGG CGAGTTGATT CTCACGATGG ACGGCGACGG GCAGAACGAT
CCGCACGATT TCCCGAAACT GCTCGCGCCC GTCGAGGCCG GCGCGCTCGA TCTCGCCTGC
GGCTGGCGCG TCGATCGCCA CGATTCATGG ACACGACGCG TGATCTCCCG CGTCGGCAAC
GCGGTCCGTC GCGTGGTGCT CGGCGATCAC CTGCACGACG GCGGCTGCCA ACTACGGGTT
TTCCGCCGCG AGATCATCGC GGCGCTGTTT CCCGTGGATC TCCTGCAATC CTTCCTGCCC
GCCATCGCCG TCGCATTAGG TTTTCGTGTC GGCGAGTTCC CCGTGCGGCA TCACGCGCGC
CGACGCGGTC GCGCCAAGTT CGGCCTGCGC AAGCTCTGGT GGCGCCCCTT CGTCGCCATG
CTGGCCGTGC GCCGGCGAAC AAGAACGACG TAA
|
|---|
| Protein sequence | MTPRFSLVVP LYNEAGNVLP LLAAANDVLA TFRGGHEIIL VDDGSTDATP ADIAAACARW
PTVRSIRHPQ NQGQAAALLT GLHAARGELI LTMDGDGQND PHDFPKLLAP VEAGALDLAC
GWRVDRHDSW TRRVISRVGN AVRRVVLGDH LHDGGCQLRV FRREIIAALF PVDLLQSFLP
AIAVALGFRV GEFPVRHHAR RRGRAKFGLR KLWWRPFVAM LAVRRRTRTT
|
|---|
| |