| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3509 |
|---|
| Symbol | |
|---|
| ID | 6208045 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 4570128 |
|---|
| End bp | 4571438 |
|---|
| Gene Length | 1311 bp |
|---|
| Protein Length | 436 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641693176 |
|---|
| Product | oxidoreductase domain-containing protein |
|---|
| Protein accession | YP_001820386 |
|---|
| Protein GI | 182415320 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.237244 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAACGC CTGCGGTGCC GTTGAGCCGG CGGGAATTTC TCAAGCGTGC GATGGCGGCG
GGGGCGGTGG CAACGATGCC CGGCGTGCTG TCATCCCGGC TATTCGGCGC GACGGCGCCG
AGCAATCAGA TCGCCGTCGG GGTGATCGGC ACGGGCAACA TCGCGCAGGG CCACATCGAC
ACGCTGCTGG GATTTCCCGA AGTGCGGATC GCCGCACTCT GCGACGTCGA TCGGGTGCGG
CTCGAGGCGA CGGCGGCGAA GGTCAACGCG TTTTACGGCG ACAACGGTTG TCGGATGTTT
GGCGACTTTC GTGAGCTGGC AGCGCGGGCG GATCTGGACG CGGTGTGGGT TTGCACGCCG
GACAACTGGC ATGCGCTGAA CGCGATCGAG GCGATCCGGC AGGGCAAGGA CGTGTACGTG
GAAAAACCGC TCACGCTGAC GATCCGCGAA GGCCGCGAGC TGGTGAATGC CGCGCGGAAG
CACGGCCGCG TGATCCAGAC CGGCACGCAA CAGCGCTCGA CGCGGCGGTT TCACGATGCG
GCGGAGTTCA TCCGCAACGG CGGGCTCGGT CGGCTCGAGC GCATCGAGGT GTTGATTCCG
GCGAACAACA AATTCACCGG CGCGACGTGG GAGCCCGAGC CGGTGCCGGC CGGGCTCGAT
TGGGACCTGT GGCTGGGGCC GGCGCCGTGG ACCCCGTTCA ACCGACAGGG TTGTCACTAC
AACTTCCGTT TCATTCTCGA TTACGCCGCC GGACAGGTGA CCAATTGGGG CGCGCACTAC
ATCGACATCG CGCAGTGGGC GCTGGGCATG GACGACTCGG GCCCGGTGGA GATCGAAGGC
CAGGGCGAGT TTCCGACGAG CGGTCTGTTC ACCACGGCGA CGAAGGTCGA CTTCACGTGC
CGCTATGCGA ACGGCGTGCC GCTGCGCTGT CGCACGCGCT ATGACGGCGT GTTCGATGGC
AACGTGCGTT TTTTCGGCGA ACGCGGCTGG ATCGACGTGT CGCGCTCCAC CAGCACGGCC
TCAGATCCGG CGTTGTTGAA AGCCGCGGCG GCGCGCGAAG GCGCGATCAA GCTGCCGACG
AGCGACAATC ATCACGACAA CTTTCTCCAG TGCCTCCGCA GTCGCGCGAG ACCCATTTCG
GACGTCGAGA CCGGGCATCG GGGCACGACC GTCTGCAATC TCGGCAACAT CGCGATGCTG
CTCGGACGGA AGCTGCGGTG GGATCCGGCG CGCGAAGCCT TCATCGACGA TTTAGTCGCG
AACCGAATGT GCGCGCGCTC GATGCGCGGG CCGTGGGGGT TGGGAATCTA G
|
|---|
| Protein sequence | MRTPAVPLSR REFLKRAMAA GAVATMPGVL SSRLFGATAP SNQIAVGVIG TGNIAQGHID
TLLGFPEVRI AALCDVDRVR LEATAAKVNA FYGDNGCRMF GDFRELAARA DLDAVWVCTP
DNWHALNAIE AIRQGKDVYV EKPLTLTIRE GRELVNAARK HGRVIQTGTQ QRSTRRFHDA
AEFIRNGGLG RLERIEVLIP ANNKFTGATW EPEPVPAGLD WDLWLGPAPW TPFNRQGCHY
NFRFILDYAA GQVTNWGAHY IDIAQWALGM DDSGPVEIEG QGEFPTSGLF TTATKVDFTC
RYANGVPLRC RTRYDGVFDG NVRFFGERGW IDVSRSTSTA SDPALLKAAA AREGAIKLPT
SDNHHDNFLQ CLRSRARPIS DVETGHRGTT VCNLGNIAML LGRKLRWDPA REAFIDDLVA
NRMCARSMRG PWGLGI
|
|---|
| |