| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3503 |
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| Symbol | |
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| ID | 6207923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 4559240 |
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| End bp | 4559851 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641693170 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001820380 |
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| Protein GI | 182415314 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.707859 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGGCCCT GGGCACGTTG GCGCGCACGG GACGATCCCC GTTGCTGCCC CATCGTGAGT
CTACCCGAAT CCGAACACGC CCGCTGGTTT ACCGAAGAAG TGCAGCCGCA CGAATCCTCG
CTGCGTTCCT ATCTGCGGGG GTTGTTTCCC ACGCTGACGG ATGTCGACGA CGTGGTCCAA
GAATCCTACG CCCGGCTGAT TCGCGCGCGC CAAGCGGGTC GGGTCACCTA CGCGAAGGCC
TTCCTGTTCA CCACGGCGCG GAATGCGGCG CTCGACCTCT TCCGGCGCCG GAAGGTCGTG
GCGATCGACG CGGTAGGCGA TTTGTCCGAC TTGTCCGTCT TGGAGGAAAG GCCGGACGCG
GCGGACGCGG CGGATCACCA GGAACGGCTC GATCTCCTGG CAGAAGCCGT GCGCCTGCTG
CCCGACCGCT GCCGCCAAGT CGTTACGCTC CGCCTGCTGT ATGGACTCTC GCACAAGGAA
ATCGCCGCCG AGCTCCGCAT CTCCGAGCAC ACGGTCAAGG CACAGCTCGC CAAAGCCATG
CGGCGTTGCA CCCACTTTTT CGAGGTGCAC GGACTGATTC CCGGCCCGCT CGCGCCCATC
GCCGAACCGT GA
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| Protein sequence | MGPWARWRAR DDPRCCPIVS LPESEHARWF TEEVQPHESS LRSYLRGLFP TLTDVDDVVQ
ESYARLIRAR QAGRVTYAKA FLFTTARNAA LDLFRRRKVV AIDAVGDLSD LSVLEERPDA
ADAADHQERL DLLAEAVRLL PDRCRQVVTL RLLYGLSHKE IAAELRISEH TVKAQLAKAM
RRCTHFFEVH GLIPGPLAPI AEP
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