| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3485 |
|---|
| Symbol | |
|---|
| ID | 6207520 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 4531181 |
|---|
| End bp | 4533403 |
|---|
| Gene Length | 2223 bp |
|---|
| Protein Length | 740 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641693152 |
|---|
| Product | heavy metal translocating P-type ATPase |
|---|
| Protein accession | YP_001820362 |
|---|
| Protein GI | 182415296 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2217] Cation transport ATPase |
|---|
| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01512] heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.333666 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.66884 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGATGAAC TGGTCGCGTT CTTGCGCGAG CAGCCGGCGG TCACCGCCGT GCGGATCGAT
CCGACTTCGC ACAGCGTGGC GGTCGCGACC TTGGGCAACG TCAATGTCGC GGATTTCAAG
GCGCGGCTCG CCGCGACGAT CGCCGGCGTC GAAGCGCAGC TGGCGGCCAA GCCCAGCGCC
AGGGCCCCGG CGGGGTATGC GCTGCGCCAG GAAGGCGGCG CGACGGTGGT CGGGCGTGAG
ACATGTGTAA CGGCCGAGAA GCTGTGGCTC TGGCGCGAGA TGGAGTGGCC GGACCTCGAA
CGCGAGGAGG CGCACGAGCA TGCTCACGGG CACGCCGAGC AGGAGTGGAA GACGCTCGCG
GTGCTGGCGA CGGTTTGCGG GGCGGCGGGG ATCGCGGGTG CGATCAGCGG GTATTTGGCG
CCGCAACTGC CGTGGCTCGC ACGGAGTTTC TTCGTGATCG GCTTGATCAC CGGCGCGTGG
GATGCCGCCG TCGATTCGTG GGAAAACCTC AAGCGGCGCG AGATCGACAT CCACTTCCTG
ATGCTGGCGG TCGCGATCGG TGCGATTTTC ATCGGCGCGT GGGGCGAGGC CGTGCTGCTG
CTGTTCCTCT TTTCCGCGTC GGGCGCCATG GAGGAATACG CGCTCGACCG CACGCAACGC
GAGGTCAGCG CGCTGCTGAA AACCGCGCCG AAGCACGCGA CGTTGATCCG GCCCGACGGC
ACGGAACAGG ACGTCCCGGT CGAGCAGCTT AAGCTCGGCA GCCGATTGCT GGTGAAACCG
GGTGAGGCGT TTGCGGCCGA CGGGGTGGTC GTCAAGGGGC AGAGCGCCAG CGATGAATCG
GCGCTCACCG GCGAGGCCAC CCCCGTGGAG AAGCGGACGG GCGATCAGGT TTTCAGCGGG
ACGATCAATC TGTGGGGCGC GATCGAGTTC GATGTCGTGC GGCTGCCTGC GGAAAGCACC
CTGCAGAAAA TCATCCGGCT GATTCAGACC GCGCAGAAGC TCAAGGCGCC GAGCGAGCGG
TTCACGGACA AGTTCGGCAC CGGCTACACC TACGCGGTGA TCGGCGGCTC GTTCGCGATG
TTCCTGCTGT GGTGGCTGGG CTTCGGACTG CCGGCGTTCA CGAACACGCC GGAGGTGCGC
TCGGCGTTTT ACCGCGCGAT GACGCTGATG GTCGTGGCGA GTCCGTGCGC GCTGGTGCTG
TCGATTCCGT CGGCGATCCT CGCCGCGATC GCGTGGGGGG CGCGTCACGG CGTGTTGTTC
CGCGGCGGCG CGGCGATCGA AAAACTCGCC GACATCACCG CGGTGGCGCT CGACAAGACG
GGCACGCTGA CGACCGGCGA GCTTGCGGTG GTCGGCACGG AGAGTTTCCC GCCGGGGCGC
GAACGCGAAG TGCTGGAGCT GGCGTATGCG CTGGAGTCCA AATCGCAGCA CCCGATTGCC
CGCGCGATCG TGCGGCACGC GAAGGCCGTT GGCGCGCGCA GCCTGGAACT CGACGAGTTT
CAGTCGCTCA CGGGCCAGGG CTTGCGCGGC AAGCTGGGCG ACGTGCAACT GTTGCTCGGC
CGCCGCGAAC TGCTCGAAAC TGGCCCGCTC GCCGGCTGGG CGCGGCGGCT GCCGCCGGCC
GCGGCCGAGT TGAGCGAGGT GTGGGTCGTG GGCAGCGATC TCGTCGGCCG CGTGCTGTTG
AAGGATCAGA TTCGCGCGGA ATCCGCCGGC GTCCTCGCCG AGCTGAAGCG GTCCGGCATT
CGCACGATCA TGCTGACCGG CGATCGCACC CATGCCGCCG AGGCGGTGGC GAAGGAGATC
GGCCTCGATG AGGTCCGCGC CGGCTTGTCG CCCGAAGACA AGGTGAAGGC GATCATGGAT
ATTCGCGCGA GCGGTCGCCG CGTCGCGATG GTGGGCGACG GCGTGAACGA TGCGCCCAGT
CTCGCGGCGG CCGATGTAAG CGTGGCGATG GGCGCTCGCG GCAGTGACGC TGCGCTGGAG
CAGGCCGAGG TGATCCTGAT GCATGACCGC ATCGAGAACT TTCTCGCGGC GCAGCGGCTG
AGCCGGCGGG CGCGCGCGGT CATTCGTCAG AATCTCACGA TCTCGCTCGG CGTGGTGATC
GTGATGGTGA TCACCACGGC GGCGGGCGCG GTGCCGCTGG CGATCGGCGT CGCGGCGCAC
GAGGGTAGTA CGCTGGTGGT CTGCCTGAAT TCGCTCCGGC TGCTGTTCGG GCGGAATCGG
TGA
|
|---|
| Protein sequence | MDELVAFLRE QPAVTAVRID PTSHSVAVAT LGNVNVADFK ARLAATIAGV EAQLAAKPSA
RAPAGYALRQ EGGATVVGRE TCVTAEKLWL WREMEWPDLE REEAHEHAHG HAEQEWKTLA
VLATVCGAAG IAGAISGYLA PQLPWLARSF FVIGLITGAW DAAVDSWENL KRREIDIHFL
MLAVAIGAIF IGAWGEAVLL LFLFSASGAM EEYALDRTQR EVSALLKTAP KHATLIRPDG
TEQDVPVEQL KLGSRLLVKP GEAFAADGVV VKGQSASDES ALTGEATPVE KRTGDQVFSG
TINLWGAIEF DVVRLPAEST LQKIIRLIQT AQKLKAPSER FTDKFGTGYT YAVIGGSFAM
FLLWWLGFGL PAFTNTPEVR SAFYRAMTLM VVASPCALVL SIPSAILAAI AWGARHGVLF
RGGAAIEKLA DITAVALDKT GTLTTGELAV VGTESFPPGR EREVLELAYA LESKSQHPIA
RAIVRHAKAV GARSLELDEF QSLTGQGLRG KLGDVQLLLG RRELLETGPL AGWARRLPPA
AAELSEVWVV GSDLVGRVLL KDQIRAESAG VLAELKRSGI RTIMLTGDRT HAAEAVAKEI
GLDEVRAGLS PEDKVKAIMD IRASGRRVAM VGDGVNDAPS LAAADVSVAM GARGSDAALE
QAEVILMHDR IENFLAAQRL SRRARAVIRQ NLTISLGVVI VMVITTAAGA VPLAIGVAAH
EGSTLVVCLN SLRLLFGRNR
|
|---|
| |