Gene Oter_3475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_3475 
Symbol 
ID6205084 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp4519275 
End bp4520369 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content65% 
IMG OID641693141 
Productglutamine--scyllo-inositol transaminase 
Protein accessionYP_001820352 
Protein GI182415286 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.576476 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTTC CGTTTCTCGA TCTCAGCCTG CAGCATCGGG CCTTGCGCGA GCCGGCGCTC 
GCCGCGCTCG CGGCGACCTA CGACGCCACG CGTTTTTGCC TCGGCAAGGA CGTGGAGGAG
TTCGAAAAGG CGTTCGGCGC CACGCTGGGC TATCCGCGCG TGCTCGGCAT GAACAGCGGC
ACGTCGCCGC TGCACATCGG CTGCATGCTC GCCGGCTTCG GTCCCGGCGA CGAGGTCATC
GCACCGCCGT TCACGTTCAT CTCGACCGTG TGGGGCGTGA CCTACGTCGG CGCGAAGCCG
CGGTTCGTGG ACGTCGAGGA GGGCACGTTC AATCTCGATC CGGCCAAAAT CGAAGCGGCG
ATCACGCCGC GCACCAAGGG CATCATCGTC GTGCATCTGT TCGGCCAGCC GGCGCGGATG
GACGAGATCA TGGCGATCGC GCGCCAGCAC CGGCTGTTCG TCATCGAAGA CTGCGCGCAA
GCAGTGGGCG CGAACTATCG CGGCCGGCCC GTCGGATTAT TTGGCGACCT GGGCACGTTC
AGTTTTTATC CGACCAAAAA TCTCGGCGGC TGCGGCGAAG GCGGCGCGCT GGTGGCGCAG
AACGAGGAAC TCTTCGTGCG CGCGCGACAC ATCCGCGTGC ACGGATCGGA CCGGCGCTAC
TACCACGATA TCGTGGGCGG AAATTTCCGC ATGGACGGCT TTCAAGGCGC GCTGCTCAAC
GTCAAACTGC CGCACCTCGC GCGGTGGACG GCGCGACGGC GCGAAATCGC CGGGCGCTAT
CTCGCCGGGA TCAAGCTCGC CGACGTGCGT CTGCCGGACC AGCCCGACTA CGGCCAGTCG
GTTTTTCACC AGTTCACGAT TCGGCATCCG CGCCGCGACG CGCTGCGCGA GCATCTGACC
AGGCACGAGG TCGGCACGGA TTTGATTTAT CCCGTTCCGC TGCACCTGCA GAAGTGCTAT
GCGAATCTTG GCTTCGGGCC CGGCTCGTTC CCGGTGGCCG AAGCGGCGGC GAAGACCTGC
GTGAGTCTGC CGATTTTCCC GGAACTCACC GATGCCCAGG TCGATCACGT CATCGCGAGC
GTCAATGCCT TTTGA
 
Protein sequence
MKVPFLDLSL QHRALREPAL AALAATYDAT RFCLGKDVEE FEKAFGATLG YPRVLGMNSG 
TSPLHIGCML AGFGPGDEVI APPFTFISTV WGVTYVGAKP RFVDVEEGTF NLDPAKIEAA
ITPRTKGIIV VHLFGQPARM DEIMAIARQH RLFVIEDCAQ AVGANYRGRP VGLFGDLGTF
SFYPTKNLGG CGEGGALVAQ NEELFVRARH IRVHGSDRRY YHDIVGGNFR MDGFQGALLN
VKLPHLARWT ARRREIAGRY LAGIKLADVR LPDQPDYGQS VFHQFTIRHP RRDALREHLT
RHEVGTDLIY PVPLHLQKCY ANLGFGPGSF PVAEAAAKTC VSLPIFPELT DAQVDHVIAS
VNAF