Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_3470 |
Symbol | |
ID | 6204280 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 4514605 |
End bp | 4516176 |
Gene Length | 1572 bp |
Protein Length | 523 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641693136 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001820347 |
Protein GI | 182415281 |
COG category | [F] Nucleotide transport and metabolism [L] Replication, recombination and repair |
COG ID | [COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase [COG2169] Adenosine deaminase |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.884533 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.876764 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTTGCGT CGCGTGCCAC AACTCCCATA TCTCCCGCCG TGGTTTCGCC CACCCATCGG CTCCGCCTTT CGCCCGCCCA GATGTATGCC CGCGTGCTCG CCGGCGACCC GGCGTGGAAC GGCCATTTTT TCACGGGCGT GCTCACCACG GGCATCTACT GCCTCCCATC CTGCAAGGCG CGCAAACCCA AACGGGAGAA CGTGCGCTTT TTTCCGACGT GTGAAGCCGC GCGCGCCGCC GGATTGCGTC CGTGCAAGAA ATGCCACCCC GACGATTTTG CCCGCGGCGC GGATCCCGTG CTCGAAAGCG TCGAGCAGCT CGTGGCCGAA ATGCGGGCCA ACCCGGCGGC GTTTTCGGAG GCGCGTGCGC TCGTGCGCCG GCTGGGGTTC GGCGTCACCC GCACGTTCGA ACTGCTCCGG CTGCACTATC ACACCACGCC CGCCGAGTTG CTCACACGCG CGCGCATCGC CGCCGCCCAG CAGCAGCTGC TCGCCGGGGC AACGCCGCTG GCCGACATCG CGTACAGCGT CGGTTTCGAT GCCCTCTCCG TTTTCCACGA AAACTTCCGC CGGCTGACCG GGCTCACGCC GGCGCGCTAT CGTGAGCTAC CCCATGCCCG GAGCTTCGAG CTGACACTGC CCGACGGCTA CCTGCTCGGC TACCTGCGCC GCGCGCTCAG CCGGGATGCG CAAAGCGTGA GCGAGCGGCT CGAAGGCGAC GTCTACACCG CCGCCGTGAA TCTGTCGGGC GGGCCGGCAT TGCTCACCCT GCGCCTCAAC CCTTCGCCCG TTCGCGTCGA GGTCATTCCG GCTGCGGGTG GCACGGGCGT CCCGCCCGTG GGTTCGCGCC CGCCTACAAA AGGCGAGCGT GTGCCGGACG TCGCAAGCGG CGTCCCTACC AACACGCTCG AGGCCCATGC GATCGCGATC GGACTGCTCG GGCTCGAGGA TGACGCGAGC TCGTTCGCGC GGCTCGCGCG CAAGCTCGGT TTGGCGCGGC TCGTCGCCGG TCGGAGTGAA CTTCGCATCA GCCGCATTCC CTCCGTGTTC GACGGACTCG TCTGGGCGAT CATCGGCCAG CAGATCAACT TCAGCTTCGC CTGCGTGTTG AAACGCCGGC TGACCGAGCT CGCGGGCACG CGGCTGTCCA ACGGACTGAT GGCGCCGCCG ACGCCGACAG CGATCGCGCG GCTCGAGCCG GACGAGCTCG TGCCCCTGCA GTTCTCGCGC CAGAAAGCAG GCTACCTGAT CACCACCGCG CGGGCAATCA CCGCGGGCGA ATTGGATCTT GCGCAGCTCC CCTCGATGTC CGCCAGCCGC GCGGAGCGCA CGCTGCTCGC GCTGCACGGG TTCGGCCCGT GGTCGGTAAA CTACGTGATG ATGCGCGCGC TTGGGTTTGC CGACTGCGTG CCGCTCGGCG ACACCGGCGT GACCAGCGGG CTGCAATCCC TCCTCCACCT CGAGCAACGG CCTGACGTCG ACGCCACGCG GCGGCTGATG GCCGTGTTCT CTCCTCACCG CAGCCTCGCC ACGGCGCACC TGTGGCAACT CAACCTCCCC CGGCCCACAT GA
|
Protein sequence | MVASRATTPI SPAVVSPTHR LRLSPAQMYA RVLAGDPAWN GHFFTGVLTT GIYCLPSCKA RKPKRENVRF FPTCEAARAA GLRPCKKCHP DDFARGADPV LESVEQLVAE MRANPAAFSE ARALVRRLGF GVTRTFELLR LHYHTTPAEL LTRARIAAAQ QQLLAGATPL ADIAYSVGFD ALSVFHENFR RLTGLTPARY RELPHARSFE LTLPDGYLLG YLRRALSRDA QSVSERLEGD VYTAAVNLSG GPALLTLRLN PSPVRVEVIP AAGGTGVPPV GSRPPTKGER VPDVASGVPT NTLEAHAIAI GLLGLEDDAS SFARLARKLG LARLVAGRSE LRISRIPSVF DGLVWAIIGQ QINFSFACVL KRRLTELAGT RLSNGLMAPP TPTAIARLEP DELVPLQFSR QKAGYLITTA RAITAGELDL AQLPSMSASR AERTLLALHG FGPWSVNYVM MRALGFADCV PLGDTGVTSG LQSLLHLEQR PDVDATRRLM AVFSPHRSLA TAHLWQLNLP RPT
|
| |