Gene Oter_3455 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_3455 
Symbol 
ID6205617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp4495527 
End bp4496474 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content57% 
IMG OID641693120 
Productglycosyl transferase family protein 
Protein accessionYP_001820332 
Protein GI182415266 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAGAC ATCCACTAGT CTCCGTTGTT ATCCCAGTGC GAGATCGCCC TATTGAACTG 
CGCCGTGCGC TGAGATCAGT GCTCGCTCAG ACGTGTAACG ATATCGAGGT GCGTATCATC
GACGATGCGT CCTTACAGCC GATCGATTCA GCGCTTGGGT CCGAGTTCTT GGACGAGCGG
GTGATCGTGT CGAGACTCAA CTCCCCGTTT GGCGCCGCTA GGGCACGCAA TGTTGGCGTG
AATCAAAGTC GGGGGAGATT CGTCGCGTTT CTCGACTCAG ACGATGAATG GTACCCCAAT
AAGCTGGCAG CTCAGCTACG ACATATCGCA ATGGCGCCAA CCGGGGTGAT CAGCTATCAT
CGCATTTTGG TGGACGATGG TGGACCTGAG CGGCCCAGGC CCGTCAGAGC AATCGCTAGA
GGGGAGGACG TCGCGGAATA TCTCTTCGTG GCTGGATGCA ATATTCAAAC ATCGACATTG
CTCGCACCGA GGGAGGTCTG GTTACAGGTG CCGTTCCGTG ACGGACTGGC CAAGCATCAA
GATTGGGATA TCGCTATAAG GGCTCAGGCG GCGAAAATTC AACTAGATTG CTGCGGCGAG
ACACTCGCCG TGTACCATGG ACGAGCAAAA CTCGGGCGGA TCTCAAACGA CAGCGATTAC
GACTACAGCA TCGCGTGGGC GCAATCGGTT GGCCGGCTGT CGCGCAGGGC CGAGGCATGT
TTCTGGTTGC GAGTCGTAGT GCCGCAGATC CGGAGTCGAC ACGGGTTTTG CAGGGCGAGC
GGTACATTTG TCAAATATGT GGCGGCGGCT AGGTTAGGCG CCGCTAGCCT ATGCAGGTTG
TTCGTGCGTG CCTGCCTGCC CGGCATCTAT TCGCATTGTT GTCAGGTGGC GCGTCGGCTC
AGCCCTGTTC GCCCGCCTTG TGAATCCTTA AAAAAGGGCC ATGAATAG
 
Protein sequence
MSRHPLVSVV IPVRDRPIEL RRALRSVLAQ TCNDIEVRII DDASLQPIDS ALGSEFLDER 
VIVSRLNSPF GAARARNVGV NQSRGRFVAF LDSDDEWYPN KLAAQLRHIA MAPTGVISYH
RILVDDGGPE RPRPVRAIAR GEDVAEYLFV AGCNIQTSTL LAPREVWLQV PFRDGLAKHQ
DWDIAIRAQA AKIQLDCCGE TLAVYHGRAK LGRISNDSDY DYSIAWAQSV GRLSRRAEAC
FWLRVVVPQI RSRHGFCRAS GTFVKYVAAA RLGAASLCRL FVRACLPGIY SHCCQVARRL
SPVRPPCESL KKGHE