Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_3437 |
Symbol | |
ID | 6206309 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 4469537 |
End bp | 4472944 |
Gene Length | 3408 bp |
Protein Length | 1135 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641693102 |
Product | fibronectin type III domain-containing protein |
Protein accession | YP_001820314 |
Protein GI | 182415248 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.230863 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.852074 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGTTTC TCGCGAATCC AGCCTTTTGG AAGGGCGTCG CCGCGGCGCT GAAGTGGCTT GCAACGAGCA AGTCGTGGTG GGCGATCGGC GCGCGGCTAG TGCTGACCGT GGCGGCTAGC TACGGCATCG GCCGTATGAT GCAGCGTAAG CTCGGTGGAC TCACTAACGG CAATCCGCTC GATGTGACAC GTGACCCGCT CACGCCGCGT CGCGTGATCT GGGGCCACTG TCGCACGGGC GGAGCGATGC GGCTGCATCA CGTGCGGGAT GTGCCAGGAG ATCCGCCAAA CGAATACCTC TACCTTATCC TCGTCTGGTG CGCGCATCGA GCGCGCGCGA TCGACTACCT GATGTTCAAC GACGAGATCG TGCGCTTCGA CGCGGCTGGC GATGCACTGG GCACCTACGC CGGATTCGCG CGCGTGACGC ACCATCTCGG CGAGTGGAAC CAGGAAGCCG ACGCCAATTT CCTCGCGGAA ATCCCAGGTA TATGGACGAG CACCGACCGC CTGCGCGGTT GCACCTATTC AGCGATCAGG CTCAAGGCTG ATCAGTCGAA GTGGCCGACA GGCCTGCCGC TCATCACGGC GGTCGGCCGC TGGCGCATCC CTTACGATCC GCGCGACGAG GCGCAGGATC CCGACGACGA CAGCACGTGG GAGTATACTG ACAACGCAGC CGTCTGCTGG CACGATTTCA ACCGGGGCGT GCCGGTGCGC GATCACACAG GCTCGCTGGT GCGGTTGTAT GGGCTCAACG CCCAGGACGA CGAGATCGTC ACTGCGGCCG CCATCACGGC AGCCAACACC TCCGATGAGC TGGTCGGGCT GGCGGCTCCC CTGACGCGGA CCCTCGACTA CACCGGCGGG CAAGCGTGGA TCGGCACATG GGAAGAAGAG CTCGATGGAC TCGTCGCGGG TATGGTCGTC TCGGGTCCGG ATATTCCCCC AAGCGCGGTG ATCGCATCGA TCAGTCGCGT GGTGCCATTC GGGTTCACCC TCGATCTCGC GCCGACGGGC ACGCACGCTG GTGCGACGGT CTCGTTCGCC GATGCTGAGG CCAGGCGGTA CACTGTCGCC GGGGCCTACG ACCTCGATGC ACAATGCTCC ACGGTGGTCG ACTCGTTCAT CAGCGCCACG GCGGGCAAGA TGTATGATGT CGCTGGCGAT GTGGTCATTC GAGTCGGCGC CTGGGAGGAG CCCGACGTCG AGCTCGACAT GAGCGCGCTG CGCGGTGCGG TGAGCGTGTC CACTCCGCTC TCCTGGCGCG AGAAGCTCAA CCACGTGCGT GGGGTCTACA CCAATCCCGA CGCCGCCTAC AACCGCACGC CGTTCCCCGC GGTGGTCAGC GATGCCTTCG TCGCGCTCGA CGGCGTCGAG CTCGCCACCG ATCTCGACCT CGCATTTGTC GCATCATCGG CTCAGGCGCA ACGGCTCGCG AAGATTAAGT TGCTGCGCAC GCGCCAGGGT ACGATCGCAA CGAAGGCGTG CAATCTGCGC GCGCTCGAAG CGGTGGCGGG CGAAAACTAC CGGTTCACTT TCGAGCCGCT CGGGTGGGAC GCGAAGGCGT TCGAGTTGCT CCGCTTCGAC CTCTCGATCG AGCGCGACAA GAAAGCAAAG CCCGGCTTCG TGATCGACAT CACCGGGCAG GAGACGGACG CGTCGATCTT CGACTGGCTG ACCGATGAGG AGAATGTCGA TGACCCGGCG CCGAACACCA ATCTCCCAAA CCCGCGCGTG GTGCCCACGC CCACTGGCCT AACACTCACG CCGGCCGCGT TCCTCCAGCC CGACGGCACA AGTCTCTCGC GCCTGCTCGC GACGTGGACG GCCGCGCCTT CGGCCTGGGT CCAGGGCGGC GGCTCGATCG AGCTGCAATA TAAGACCACT GCGGCACCCG TATGGCAGAC GCGCATGCTG CCCGGCACGG CCGAGCACGA GATCCTCGCC GATCTTTGCG GGCTGCTCGA CTACGATGTC CGGCTGCGGT TCCGCAACAT GCTCGGCGTC TATGGCGCCT ACTGTGCGCC GGTGACGGAG ACCGCACCGG CCGACAGCGT GGTGCCGTCC GCACCGACGG GCCTGACGGC CTCGGCTGGC ACGGGCAAGG CCGTGCAGCT GAGCTGGACC AAGCACTCCG ATCCTCGGGT CGCGGAGTAC GGTATTTACC GTCACTCGAG CAACACGCCG GCAAGCGCGA CGCGGATCGG CCAGGTGAGC GGGACCAGTT TCGTCGACCT CAAGATGCCG CTAGATGCGA CTTCTTACTA CTGGGTCACC GCCGAGAGCG CGTCGAATGT CGAAAGCGCC AAGAGCACGG TCGCGAGCGC CACGCCGCAG AGCATTCCCG AGGGTGGCAT TGATCCTACG CCGCCAGGTA ATCCATCAGC GCCGACGCTC TATATCACTG GCACCACGAT CGCAGCGGAT GGCAGCGCCA CGGCCAAGCT GGTCATCAAT CTGCCGGCGC TTCCGTCGCT CGCCGTCGGG CTCAATGTGT TCTGGCGAGT GCACGGAGTG GCTGCCGGCT GGGTGCTGGC CGATCAGATT GACGAGGATC GGCGAGCAGC GGACAGCCGC GCCACGATCG ACGACTTGCC TACCGGGACG TCAGTCGATG TCGCTGTGCA GGCGTATTCG GCTTATGGTA TTTGCTCCGC GGTGGTCGAG GCGACCGGCT CGCCGTTCAC GACGCCGACG CCCGCCGCGC CAAGCGCTCC ATCCGGGTTG GTGCTCAGCA CGACAGCGAG CGACGTCAAC CGCGTGCCCC CGGCCTATGC CGGCAGTGGT GGGACCAAGT ATTCTGCGGC GATGCTCAAG TGGACCGCTT CGCCTTCCAA GGATGTCGCG TATTACGAGA TCCGGCGCGA CGCGGGCGTG CCAATTACGC TCGGCCGCAC GAAGGGCACC GAGACGGAGT TTCCGCTGTA CGCGGGGCTC CAGATCAATT CCGTGACTGA CGACATCGGC GTGCGGGCGG TGAGTCGTTC CGGGGTAGGG TCGACGTGGA CGACCAAGAC TGTGCCTCAC TCTTTCACCG ACAACTACGG AACCGCCGAC ATGGCGGAGC AGTCATCCTC GGCTGTCGCG GTCACCGGCA TCCAGACCGG CAACGGATCG AGCGTGCGAA AGGTACTCGC GCGCTACCAG AACAGCGCCG TGCCCACACT CACGGGTGGT GCGGCGACAG AGAATTTTAA CGTCTCACTG TCTAACCGGG GTTTTTCGAC GAAGCCGGAT GCAGGCTACG CACAGAGCTC AAGCGACGCC GCTGTGCTTG CAGCGTATGA CTTCGACGCC GCTGGGAACA GCTCCAGCAA CGCGGTAATC CGCGTCACGA GGCGAGACGG CGCCAATCTG GGCGCCGGTC CCTGTCGGTT CTCCATCGAA CTTCTTGAGT ACGACTAA
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Protein sequence | MPFLANPAFW KGVAAALKWL ATSKSWWAIG ARLVLTVAAS YGIGRMMQRK LGGLTNGNPL DVTRDPLTPR RVIWGHCRTG GAMRLHHVRD VPGDPPNEYL YLILVWCAHR ARAIDYLMFN DEIVRFDAAG DALGTYAGFA RVTHHLGEWN QEADANFLAE IPGIWTSTDR LRGCTYSAIR LKADQSKWPT GLPLITAVGR WRIPYDPRDE AQDPDDDSTW EYTDNAAVCW HDFNRGVPVR DHTGSLVRLY GLNAQDDEIV TAAAITAANT SDELVGLAAP LTRTLDYTGG QAWIGTWEEE LDGLVAGMVV SGPDIPPSAV IASISRVVPF GFTLDLAPTG THAGATVSFA DAEARRYTVA GAYDLDAQCS TVVDSFISAT AGKMYDVAGD VVIRVGAWEE PDVELDMSAL RGAVSVSTPL SWREKLNHVR GVYTNPDAAY NRTPFPAVVS DAFVALDGVE LATDLDLAFV ASSAQAQRLA KIKLLRTRQG TIATKACNLR ALEAVAGENY RFTFEPLGWD AKAFELLRFD LSIERDKKAK PGFVIDITGQ ETDASIFDWL TDEENVDDPA PNTNLPNPRV VPTPTGLTLT PAAFLQPDGT SLSRLLATWT AAPSAWVQGG GSIELQYKTT AAPVWQTRML PGTAEHEILA DLCGLLDYDV RLRFRNMLGV YGAYCAPVTE TAPADSVVPS APTGLTASAG TGKAVQLSWT KHSDPRVAEY GIYRHSSNTP ASATRIGQVS GTSFVDLKMP LDATSYYWVT AESASNVESA KSTVASATPQ SIPEGGIDPT PPGNPSAPTL YITGTTIAAD GSATAKLVIN LPALPSLAVG LNVFWRVHGV AAGWVLADQI DEDRRAADSR ATIDDLPTGT SVDVAVQAYS AYGICSAVVE ATGSPFTTPT PAAPSAPSGL VLSTTASDVN RVPPAYAGSG GTKYSAAMLK WTASPSKDVA YYEIRRDAGV PITLGRTKGT ETEFPLYAGL QINSVTDDIG VRAVSRSGVG STWTTKTVPH SFTDNYGTAD MAEQSSSAVA VTGIQTGNGS SVRKVLARYQ NSAVPTLTGG AATENFNVSL SNRGFSTKPD AGYAQSSSDA AVLAAYDFDA AGNSSSNAVI RVTRRDGANL GAGPCRFSIE LLEYD
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