Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_3378 |
Symbol | |
ID | 6208681 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 4430178 |
End bp | 4432937 |
Gene Length | 2760 bp |
Protein Length | 919 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641693043 |
Product | glycoside hydrolase family protein |
Protein accession | YP_001820255 |
Protein GI | 182415189 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.825793 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTCTT CCCTCAAAAC CGGATTCACA TTCGCTTTCG TCGGGCTGCT TGGATTCTTC ACGGCGCAGT CGCTCCCGGC GGAGCAGCCG TTTGCCGCCC ATGGCGAGCG GTCGTCCGCC CAACTGCGTG AACGGCTGCC CCTGAACGAC GACTGGCGAT TTCAAAAAGA CGATCCGCCG GGCAACACCG TCAGTCTCGA CTACGATGTT CGTCCCGTGG TGACGACGAA CCAGGACGGC CGGGCGGCGG ATGCCGAGCC GACGGAAGCC GAGAAGCTCG CCGCCGCCTC GCGCGTGGTG CTGAAGCCGT GGATCCTGCC GACCGGGAAT GCGTTCATCA AGGATCCGGC GCCTCGATAC ACCCGGCCGG CGGGCGACCC GGGCAGCGAC GTGGCGTATG TGCGGGCGGA TTTCGACGAT CAAGCCTGGC GGCGCGTGAA CCTGCCGCAT GACTGGGCGA TCGAAGGGCC GTTTCTCACC ACCGGCGATT TCGGCGGCAT GGGCAGGCTG CCCAGCTGGG GCATCGGCTG GTATCGGAAG GCGTTCGATC TTCCCGCGGA GGACGCCGGC AAATCGATCG TCCTCGAGGT GGATGGCGCC ATGTCGTACG CGACGGTCTG GTTGAATGGT CACCTCGTGG GCGGCTGGCC GTATGGCTAC TCGTCGTGGC AGGTGAACCT GACGCCTTAC CTCGCTTTTG GCGGCAGAAA CCAACTCGCG ATCCGGCTCG ACAATCCGCC CGCCTCGTCG CGCTGGTATC CGGGCGGCGG GATTTATCGC AACGTGTGGC TGACGAAGAC GCAGCCGGTG CACGTCGGCC AGTGGGGCAC CGCGGTAACG ACGCGTGACG TGACGTCGCG TTCGGCGACG ATCGAGCTCG CGGTCACCGT CGACAACGAC GGCCGGGAGC CTGCGCCGAT CAGCGTGAGC TCGGAGATCT TCGCGCTGGA TTTGCAGGGC CGGAAAACGG CGGAGGTGGT CGCGCGGACG GAGGCCATTG AAACCCAAGT GGCGGCGGGC GCGGCCGCGA CCGTGCGGAG TTCGGTCGCG CTCGCGAATC CGAAGTTGTG GGGGCCGCCG CCGACCCAGC AGCCGCATCG CTACGTGGCG GTGACGACCG TGACCCGCGC CGGCCAGCCG GTGGATGTCT ACGAGACGCC GTTCGGCATT CGGACGCTGC GGTTCGATCC GGCGGCGGGA ATTTTTGTCA ATGGCGAGCG GATCAAGCTC CAAGGCGTGA ACCAGCACCA CGACCTTGGC GCGTTGGGCG CGGCCTACAA CGAACGCGCG GCGGAACGGC AGCTGGAGAT GCTGCGTGAG ATGGGCTGCA ACGCCGTCCG GATGAGCCAC AATCCACCGG CGCCCGAGTT GCTGGAGCTG ACCGATCGGA TGGGTTTTCT CGTGATCGAC GAGTCGTTCG ATGTCTGGGA GCGCAAGAAG ACGCCGCTCG ATCACCATCT GATTTTCCCG GACTGGCACG AGCAGGATTT GCGCGCGCTG ATCCGGCGCG ATCGCAATCA TCCGTCGGTG ATCGTGTGGA GCGTCGGCAA CGAAGTCGGC GAGCAATACA CGGGCGAGGC CGGAGCGGCG GTGGCGAAGC GGCTCGTCGC CATCGTACAC GAGGAGGATC CCACGCGGCC GGCGACCAGC GCGATGAACT ACGCCAGCCC CGACATGCCC CTGCCGGCGG CGCTGGATGT GATCAGCTTG AACTATCAGG GGGAGGGAAT TCGCGACACG CCGGAGTTCG AAGGCACGGA GCGAATTCGG AAGACGCCGC AGTATCCGGC GTTTCACGCG CAGTTCCCGC AGAAGGTGAT CCTGACGAGC GAGAGCGCGT CGGCGTTCAG CAGTCGCGGC GTTTACCTTT TCCCGGTGAC GCCGAAGATC AGCGACGTGG TGCGCGACGG ACGTGGCGGC GACTCCACGA TTCACCAGGT GAGCGGGTAC GAGCTGCACG CGGTGGATTT CGGCTCCTCG GCGGACAAGG TCTTCGGTTC GCTGGATCGT CATCCTTACG TGGCGGGCGA GTTCGTGTGG ACCGGGTGGG ATCATCTGGG GGAACCCACG CCCTATTACA CCTCGCGGAG CGCGTATTGC GGGATCATCG ACCTGGCGGG GTTCAAGAAA GACCGGTTCT ATCTGTACCA GTCGCGCTGG CGGCCCGACC TGCCGATGGC GCACCTGCTG CCGCATTGGA CCTGGCCGGA ACGCGTGGGT CAGGTGACGC CGGTGCACGT GTTCACCTCG GGCGACGAGG CCGAGCTTTT CCTGAACGGG CAATCGCTCG GTCGGAAGCG CAAGGGCGCG TATGAATACC GGTTGCGCTG GGACGACGTG GTCTACGCGC CGGGCACGCT CGAAGTCGTT GCCTACAAGG ACGGGAAGAA GTGGGCGACG GACCGCGTGG TGACGGCGCA GCCGGCGGCC GCGTTGACGG CGGAGCCGGA CCGCGCGGAG ATCCGGGCGG ATGGCCGGGA TCTGTCGTTC GTCACGGTGC GGGTGGTGGA CGCGGCGGGC GTGTTGGCGC CGCGGGCGGA CCATCGGATT CGGTTCCAGA TCGCAGGGCC GGGCGAGATT GTCGCGACCG ACAACGGGGA TCCGACGAGC TTCGAGTCGT TCCAGGCGCC GGAGCGAAAA GCGTTCAGCG GACAGTGCCT GGTGATCGTC CGCGGGCAGC GCGGCCAGGC GGGGAAGATC ACAATTACGG CCTCCGGCGA AGGGCTGGAG GAAGCGGTCA CGGTGATCAC CGCGAGGTGA
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Protein sequence | MTSSLKTGFT FAFVGLLGFF TAQSLPAEQP FAAHGERSSA QLRERLPLND DWRFQKDDPP GNTVSLDYDV RPVVTTNQDG RAADAEPTEA EKLAAASRVV LKPWILPTGN AFIKDPAPRY TRPAGDPGSD VAYVRADFDD QAWRRVNLPH DWAIEGPFLT TGDFGGMGRL PSWGIGWYRK AFDLPAEDAG KSIVLEVDGA MSYATVWLNG HLVGGWPYGY SSWQVNLTPY LAFGGRNQLA IRLDNPPASS RWYPGGGIYR NVWLTKTQPV HVGQWGTAVT TRDVTSRSAT IELAVTVDND GREPAPISVS SEIFALDLQG RKTAEVVART EAIETQVAAG AAATVRSSVA LANPKLWGPP PTQQPHRYVA VTTVTRAGQP VDVYETPFGI RTLRFDPAAG IFVNGERIKL QGVNQHHDLG ALGAAYNERA AERQLEMLRE MGCNAVRMSH NPPAPELLEL TDRMGFLVID ESFDVWERKK TPLDHHLIFP DWHEQDLRAL IRRDRNHPSV IVWSVGNEVG EQYTGEAGAA VAKRLVAIVH EEDPTRPATS AMNYASPDMP LPAALDVISL NYQGEGIRDT PEFEGTERIR KTPQYPAFHA QFPQKVILTS ESASAFSSRG VYLFPVTPKI SDVVRDGRGG DSTIHQVSGY ELHAVDFGSS ADKVFGSLDR HPYVAGEFVW TGWDHLGEPT PYYTSRSAYC GIIDLAGFKK DRFYLYQSRW RPDLPMAHLL PHWTWPERVG QVTPVHVFTS GDEAELFLNG QSLGRKRKGA YEYRLRWDDV VYAPGTLEVV AYKDGKKWAT DRVVTAQPAA ALTAEPDRAE IRADGRDLSF VTVRVVDAAG VLAPRADHRI RFQIAGPGEI VATDNGDPTS FESFQAPERK AFSGQCLVIV RGQRGQAGKI TITASGEGLE EAVTVITAR
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