Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_3371 |
Symbol | |
ID | 6204257 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 4413971 |
End bp | 4415917 |
Gene Length | 1947 bp |
Protein Length | 648 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641693036 |
Product | GDSL family lipase |
Protein accession | YP_001820248 |
Protein GI | 182415182 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2755] Lysophospholipase L1 and related esterases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.754827 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.777259 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGAGCC GATTTTTTCT GATCAACCGG AGCCTCCGGG CGGTGCGGCC CGCACTGCGC CCGGCGGGGT GGCTCGCGTG TTGCGGGCTG CTGCTCGCCC CATGGGCGCA GGCGCAGTCG CTCAGCACGC CGGTGGCGCG GACGGATGGC AATTCGCTCC TGGCGCACGA GCAGCTGCTC GCGAAAGCGC GACGCGGCGG AGTCGACGTT TACTTCGTCG GTGACTCGAT CGCGCGTCGC TGGGGCGCGA GCGAAGCCCT TTACGCCGCG TTTCTCGAAC ATTGGAACGC GACCTTTCGC GGCTGGAATG CCGGCAACTT TGCCTGGGGC GCCGACGGGT TGCAGCACAT CCTGTGGCGG ATCGAGAACG GCGAACTCGA CGGCGTGAAT CCCGATGTGA TCGTGATCCT CGCCGGCGCG AACAATGTTG GCACCGCCAT CGGCTCCGAT GCCGGCGTCG CTGCGTTGGT CGAGGGCGTG GCGCATCTGA TCGAGCGCTG TCGTTACAAG GCGCCGTCCG CCACGATCAT CCTGACCGCG CTGTTTCCGA GCGGTACGCT GGCGGTGATG CCGACGATCA ACCGGATCAA CGCGGGGCTC GCGGCGCTCG CCGACGGGCA GACGGTTCGA TTCCTCAACG TCAACTCCCG CCTCACGGAT GCGGCTGGCG CGCTGTTGCC GGGCATGATG GGCGATGGGC TGCACCCGAC GCTGCAAGGT TATCAAGTCT GGGCCGACGG GCTGACCCCG CTGCTGACGG AATTACTGGG TCCGCGCGAA CCGGCCAACG ATCACGCCCC GCCGCCGACG GGCGATCCGA GTGCGCTGCG GCCCGTCTAC TCTCCTTCGA CGAGCCCGCC ATTCGTGCCG GCGCAGAGCC TCGCGGTGCC GGTGGGCGCG ACCTCGGGAA AGGTCGTGGG CACGGTGCAG GCGATCGATC CGGACGCGGG GGAGGTCGGC GATTGGCTGA TCACCGGTGG CACCGGCGCG GGAGTCTTCG CAGTCAATGC GAACACCGGA CAGTTGACCG TTGCCGCCGG CCCGCTCGCG GCAGGTTCAA GCTACACGCT AAGCCTCTCG ACGCGAAATG GCTTCGGGCG CAGCGCAGCC GGCACGGTCA CGGTACGCGT GACCGATCAG CCGCAGAAGG TGACGGGCTG CGGTTACGAA TTCGCCGCGG ACATCACGCA TCCCAACGGC AATGTCTACG ATCAGGTATT GTTAACCGGA CCGATCGTCA CGATCCGCGC CGATCCGGGG CAGATGGTCC GGGCCTCCTA CCTCGATCTC AACGACGACA TCGTCCAGAT CGAATTCGCG GGCCCTGGCG AGCTGACGGT CTCGCTCGCG GCGGCGAGCG CACCGGCGTT CCCGCAAAAC TACCGGCAGG AGATCAACTA TGTGAAGGGC CATGCCACGA TCGCGATCGC CGGCGCCGAC GAAGCGACGA ATCTGAGCGT CTTCACGGTC GGTCGAAAAA CCGCGGTGCA GCAGTCGCTT TTCCTGGAGG TGCTCTACGA CGGAATCGCC GACCTCGCGC GAGTCATCAT CGCCAGTCCA ACGCGCCGCT TTGGCGGGTT GCGCACGGCG GATGCGGAAT ACTGGGCGAC GTACGGCGAC ACCGGGATCA GCGCGCCCGG CGTCCGGTTC AGCGGGCCCG TGAACCTGCA CAATATCTCG GCGCGCGAGC AGGCGGTGCC GGTGCTCGTG ACCGGTCCGA TCGATCCACG CGAGGTCGAA GGCAGGACGA TCGATGGTTG CGTGCTCGTC GCAGGCGGCG ACATGGCTCA GCCCGGCGGT CGCGCCATCG AGGTGGGCGA CGTGGCGGCC ATCTACTTCG GTGGGGGCGA GGATTCCCAC GGCACGCCCC TCCCGGCGCA GCAGAACCGC GCGAGTTTCA TTCGCCAACG ACAGGACGTG ACGGCGGCCG TGGTGCGGAC CCAATAA
|
Protein sequence | MKSRFFLINR SLRAVRPALR PAGWLACCGL LLAPWAQAQS LSTPVARTDG NSLLAHEQLL AKARRGGVDV YFVGDSIARR WGASEALYAA FLEHWNATFR GWNAGNFAWG ADGLQHILWR IENGELDGVN PDVIVILAGA NNVGTAIGSD AGVAALVEGV AHLIERCRYK APSATIILTA LFPSGTLAVM PTINRINAGL AALADGQTVR FLNVNSRLTD AAGALLPGMM GDGLHPTLQG YQVWADGLTP LLTELLGPRE PANDHAPPPT GDPSALRPVY SPSTSPPFVP AQSLAVPVGA TSGKVVGTVQ AIDPDAGEVG DWLITGGTGA GVFAVNANTG QLTVAAGPLA AGSSYTLSLS TRNGFGRSAA GTVTVRVTDQ PQKVTGCGYE FAADITHPNG NVYDQVLLTG PIVTIRADPG QMVRASYLDL NDDIVQIEFA GPGELTVSLA AASAPAFPQN YRQEINYVKG HATIAIAGAD EATNLSVFTV GRKTAVQQSL FLEVLYDGIA DLARVIIASP TRRFGGLRTA DAEYWATYGD TGISAPGVRF SGPVNLHNIS AREQAVPVLV TGPIDPREVE GRTIDGCVLV AGGDMAQPGG RAIEVGDVAA IYFGGGEDSH GTPLPAQQNR ASFIRQRQDV TAAVVRTQ
|
| |