| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3369 |
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| Symbol | |
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| ID | 6204272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 4409168 |
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| End bp | 4410229 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641693034 |
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| Product | RpoD family RNA polymerase sigma factor |
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| Protein accession | YP_001820246 |
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| Protein GI | 182415180 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.453528 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCTCA AAACGAAAGC CCTCTCCACT CCTGACGAGA CCGAGACGTA CACCGCTCCC
ACCGTCGAAC TGCCGGACGC TCCTCCCTCC TTCCTCGAAA AGCCGGATCG CGTCGCGGAT
GTGCCGGTCG CCCATGGCGA TCGGAGTAAC CTGCAGCTTT ATCTTCAGGA GATTGGAAAG
ACCGCGCTCC TGACCATCGA TGAGGAAATC AGCCTCGCGA AACGGATCCG CAAGGGCGAC
AAGGCGGCCC GGGATCACAT GATCAAGGCC AATCTGCGGC TGGTCGTGAA GATCGCCATG
GATTACAAGG ATTTTGGCCT GCCGCTGCTC GATTTGATCA GCGAGGGTAA CATCGGCTTG
ATCAAGGCCG TGGAACGTTT CGATCCCCGC AAGGGCGGCA AGCTCTCCAC CTACGCCGCA
TGGTGGATCA AGCAGTCGAT CAAGCGGGCG CTCGCCAACC AGTCGAAGAC GATCCGACTC
CCCGTCCACC TCGTGGACAA GATTTCCAAG ATGCGCCGCA CGGCGATGGC GCTCACCGAA
GAACTCGGCC GCGAGCCGAC GGACGAAGAG TTGGCGATCG AGCTCCAGAT CCCGACCAGC
AAGGTCGCGC ACCTGAAATC CGTGAGCGTC CGGCCCGCCT CCCTGGATGC CCCCGTCGGC
GAGGAAGGCG ACTCCGCCAC CTTCGGCGAG ATCGTCGGCG ACGACAACGC GGTCAGCCCG
TTCGAGGGCC TGCGCGAGAA GAATCTCAAC TCGGACCTGC ATGCCATGGT CGCGTCCCTC
GATGAACGCG AGGCCGAGAT CATCCGGCTG CGGTTCGGGT TGGACGGCAA GGACGAGCTG
ACGCTCGAGG AAGTGGGCCG CCGGTTCCAC GTCACGCGCG AGCGGATCCG CCAGCTCGAA
TACCTCGCCC TGTCGAAGAT GCGTAAGGCG ATGGCCAAGC ACGAGGCGAT CCGCACGTCC
GAGGAAATCG AGGAAGAGGA TCGCGTCCGT CAGCGGATGG ACGTGATTCG CGAATTCATC
GAGGCCAAGT CCAAGCGGGT CGGCCGCACC GGCCGCAACT GA
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| Protein sequence | MPLKTKALST PDETETYTAP TVELPDAPPS FLEKPDRVAD VPVAHGDRSN LQLYLQEIGK
TALLTIDEEI SLAKRIRKGD KAARDHMIKA NLRLVVKIAM DYKDFGLPLL DLISEGNIGL
IKAVERFDPR KGGKLSTYAA WWIKQSIKRA LANQSKTIRL PVHLVDKISK MRRTAMALTE
ELGREPTDEE LAIELQIPTS KVAHLKSVSV RPASLDAPVG EEGDSATFGE IVGDDNAVSP
FEGLREKNLN SDLHAMVASL DEREAEIIRL RFGLDGKDEL TLEEVGRRFH VTRERIRQLE
YLALSKMRKA MAKHEAIRTS EEIEEEDRVR QRMDVIREFI EAKSKRVGRT GRN
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