| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3354 |
|---|
| Symbol | |
|---|
| ID | 6205043 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 4385172 |
|---|
| End bp | 4385963 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641693019 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001820231 |
|---|
| Protein GI | 182415165 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0226] ABC-type phosphate transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.468556 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACATC CACTCAGTTC CAACCTTCGC TCTTCCCCCG TGACCAATCG GGGACTCGCC
TGCCTGCTGC TTTCCGTTGC GCTCCTGACC GGTATTACCG TCGGCCGGGC CGTTGAACCC
CTGCGCATGA GCGGGGCAGC CGCCCTCTGC GCGGCTTTGA ATAAAGGACA GAGTACGCTC
GATCAGTCCG CCGGAGGACC GGTGCAGCTG ATCAGCAAGA ATGCGGGCAA GGGATTGCAG
GATGTCAGCT CGGGCGCATG CGACATAGGC ATGGTGACGG GATCGATCGA ACGCGCAGCC
GCCGGCGCTA ATGCGGAAAA GCCGGGCAGC GTTGATCTCG CCAAGTTGGT CCCGGTTGAG
ATCGGCCGCG ATCCGATTCT CTTCGTGGTG CATCCGTCCA ATTCCGTGAG TTCGCTGACG
ATCGCGCAGA TCAAGGAGAT TCTCACCGGT GCGATTCAGA ACTGGAAAGA AGTGGGCGGC
CACGACGCAC CCATCACCGT ATTCTCGCTT GGGCCGCGAA ATGGCCCACG CATCGGTGTG
GACGAGCAGG TGCTGCTGGG GGCTGCGGTG ACGAAAACCG CCATCCAGCG CGAGACGCCG
CGCGATATCT GTCCGATCGT CGCGCAAAAA CCGGATGGTT TCGGATTCGT CGGAAAGTCG
AATTTTGGGC CCGGCGTGAA AGTGCTGCAG ACCGACAAGC CGGTTGGCAT GGCGTTCTTT
CTCGTCACCA AAGGCAGTCC GAGCGCACTC CAAGCCAAGG TCATCGAGGC GGCGCGGTCC
GTCGTAAACT AG
|
|---|
| Protein sequence | MKHPLSSNLR SSPVTNRGLA CLLLSVALLT GITVGRAVEP LRMSGAAALC AALNKGQSTL
DQSAGGPVQL ISKNAGKGLQ DVSSGACDIG MVTGSIERAA AGANAEKPGS VDLAKLVPVE
IGRDPILFVV HPSNSVSSLT IAQIKEILTG AIQNWKEVGG HDAPITVFSL GPRNGPRIGV
DEQVLLGAAV TKTAIQRETP RDICPIVAQK PDGFGFVGKS NFGPGVKVLQ TDKPVGMAFF
LVTKGSPSAL QAKVIEAARS VVN
|
|---|
| |