| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3333 |
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| Symbol | |
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| ID | 6206787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 4357752 |
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| End bp | 4358693 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641692999 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_001820211 |
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| Protein GI | 182415145 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTATGT CACTGCGCTT GGCCGCGGTT TTCGCGGCGT GTTGTTGGGT GCCGCTGACC
GGCTACGCTG GTCCACGCGT GGGAGTGTTG TTGAAGGATC GTTTGCCCGG ATTCTGGGTG
TACGCGGAGC AGGGCGCGGT CGAGACCGGC GAGCAATTGG GCGCCGAGGT GATCGTCAAG
GCCCCGCCCT CGGTGCTCGA TGTGGGTTTC CAGCCGCGGT TGCTGGCCGC GCTGGCGACG
CAAAATCTCG ACGCGCTTGT GGTGGCGCCG ACGAATCCCG ACGCGGTCGA AGCGATGGTA
CGCGAACTGG CGGGCAAAGG CGTGAAGATC GTCACGCTCG ACACGCCGTT CAAGGACGGG
GTGGCGGATG TTTTCGTGGG AGCGGACCAG GCGGTGATTG CGGCCGCCGC GGCGCAGGTG
TTTCTCGAGC TGGCGAAGGA TGGCGACGAA GTCGCGTTGC TGCGCAACAA CAGTCTCGAC
CGGCCGGTGT TATTGCGCGA ACAAGCGCTC CGGCAGGCGG TGCAAAGTCG GAGCGGACTC
GTGCTGCACG CGGATGTTTT TGCCAGCAGC GAGAAGAATC AGGAGGATCA GCAGGCGCAG
CTGCTGCTCA CTCAGCATCC GAAAATCAAG GCGGTCTTCG CGTCCGCGAC CCGCGGTACC
CTCTCGACGA TCCGTGCGAT TCGGCAGAGC GGGCTCGTCG GCAAGGTGAA GGTGGTGGGC
TTCGGCACGT ATCTGCCCGA CGAAGCCGCG CAGGCGTTCG AGGACGGGAT TCTGCATGGC
TGGGTCGCGC AAGAGCCGAA GGATCTTGGC GTGCAGGGCG TACGCGCCGC CGTGGCGCTG
GCGAAGGGCG AGTCGGTGCC GGCGGTGGTA CGGCCGGCGT TCGTGCTCGT GACGAGCGAC
AACTTCCGTT CGCCGGAGGT GCAGGCGCTG CGGAAACCGT AG
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| Protein sequence | MAMSLRLAAV FAACCWVPLT GYAGPRVGVL LKDRLPGFWV YAEQGAVETG EQLGAEVIVK
APPSVLDVGF QPRLLAALAT QNLDALVVAP TNPDAVEAMV RELAGKGVKI VTLDTPFKDG
VADVFVGADQ AVIAAAAAQV FLELAKDGDE VALLRNNSLD RPVLLREQAL RQAVQSRSGL
VLHADVFASS EKNQEDQQAQ LLLTQHPKIK AVFASATRGT LSTIRAIRQS GLVGKVKVVG
FGTYLPDEAA QAFEDGILHG WVAQEPKDLG VQGVRAAVAL AKGESVPAVV RPAFVLVTSD
NFRSPEVQAL RKP
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