Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_3331 |
Symbol | |
ID | 6207813 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 4354814 |
End bp | 4356619 |
Gene Length | 1806 bp |
Protein Length | 601 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641692997 |
Product | glycoside hydrolase 15-related |
Protein accession | YP_001820209 |
Protein GI | 182415143 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.487654 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATCTCG AGTGCTACGG ATTCATCGGC GACCTGCACA CCTGCGCGCT CGTCGGGGTC AACGGTTCCG TCGACTGGCT GTGCCTGCCG CGCGCCGACT CGCAGGCAGT GTTTGCAGCG TTGCTGGGGG ACGAGAACAA CGGCTGCTGG CGGATCGCGC CGCGCGAGCC CGCGATCCGC TCGGGACAGA GTTATCAGCC TGACACGCTC GTGCTCGAAA CCGAATTCGA GACTTCCTCG GGGGTGGTGC GCGTGATCGA CTGCATGCCG CCCGGCCGCT CGCGACGCGA CCTCGTGCGC GTGGTGCAGG GCGTTCGGGG CTCGGTGCCG ATGGCGCTGC GGCTGGTGAT CCGGATGGAT TACGGCCGCA CGATTCCCTG GGTGCGACAT GCCGACGGCG GCGGGATGAT GGCGGTGGCC GGACCGGACG CGGTGGTGTT GCGCACGAAT GTGCCGACGC ACGGCGAGCA GTTGTCCACG GTGGCAGAGT TCGTGGTGCA CGAAGGCGAC AAAGTGCCAT TCGTGCTGAG CTGGTTTCCC TCGCACACGC CGCAGCCGGA TCCGATCGAT CCGCTGCGCG CGCTCGAGCG CACGCAACTG TTCTGGCGCG AGTGGGTGTC GCGCTGCACG TATCGCGGCG AATGGCGCGA CGCGGTGGTC CGGTCGTTGA TCACGTTGAA AGGACTGACC TACGCGCCGA CGGGCGGGAT CCTCGCCGCG GCGACCACTT CGCTGCCGGA GCAGATCGGC GGCGTGCGCA ACTGGGACTA CCGCTACTGC TGGCTGCGCG ACGCGACGTT CACGCTGTAT TCGTTCATGG AGGCGGGCTA CACCGAGGAG GCGGCGGCGT GGGGCGACTG GCTGCTGCGC GCGGTGGCGG GCGATCCCGC GCAGCTCCAG ATCATGTTTG GCGCGGCGGG CGAGCGCACG CTGACGGAGC TGGAGCTCCC ACATCTTGCC GGCTTCGAAG GTTCGCGGCC GGTGCGGATC GGCAACGCCG CGTCCGCGCA GTTCCAGTTG GACATCTACG GGGAGGTGCT GGATGCGATG CACCTCGCGC GCAAAGTCGG GCTGAGGCTG GGCCCGCACT CGTGGAGCCT GCAGCGGCAC CTCGTGGATT TCGTGGTTAA AAACTGGCGC GAACCCGACG AGGGCATTTG GGAAATCCGC GGGCCGCGGC GGCATTTCAC CCATTCGAAG GTGATGGCGT GGGTGGCCCT CGACCGCGCG GTGAAGGCGA TCGAGCAGTT CGACCTGCCG GGCGACCTTG AAGGCTGGAG CCGGGCGCGG GAGGAGATCC ACACCGACGT CTGCGAACAC GGATACAACA AGCAGCGGCA GGCGTTCACG CAGTACTACG GCGCCGATTT GCTGGATGCG AGTTTGCTGA TGATGCCGCT GGTCGGGTTC CTGCCGGCGC GTGATCCGCG CGTCGTCGGA ACGGTCGAGG CCATCCAGCG CGAGCTCGTG CAGGACGGGC TGGTCTATCG CTATCATCCG CTGCGCTCGG GGAACGTCGA CGGATTACCG CCAGGCGAGG GGGCGTTTTT GCCGTGTTCA TTCTGGCTGG TGGATTGCCT GAAGCTGATC GGTCGGGAGC GGGAGGCCCA CGAGCTGTTT GAGCGGCTGC TGGGCCTGCG CAACGGGCTC GGGCTGCTCG CGGAGGAATA CGATCCGGGG CATCGCCGGC TGGTCGGCAA TTTTCCGCAG GCATTCTCGC ACATCGGGCT GATCAACTCG GCGCAGAATC TCTCGCGGGG GGCGGTGGGG CCCGCGGCGG GCCGTAGTTC CGAGTCGGAA CATTGA
|
Protein sequence | MNLECYGFIG DLHTCALVGV NGSVDWLCLP RADSQAVFAA LLGDENNGCW RIAPREPAIR SGQSYQPDTL VLETEFETSS GVVRVIDCMP PGRSRRDLVR VVQGVRGSVP MALRLVIRMD YGRTIPWVRH ADGGGMMAVA GPDAVVLRTN VPTHGEQLST VAEFVVHEGD KVPFVLSWFP SHTPQPDPID PLRALERTQL FWREWVSRCT YRGEWRDAVV RSLITLKGLT YAPTGGILAA ATTSLPEQIG GVRNWDYRYC WLRDATFTLY SFMEAGYTEE AAAWGDWLLR AVAGDPAQLQ IMFGAAGERT LTELELPHLA GFEGSRPVRI GNAASAQFQL DIYGEVLDAM HLARKVGLRL GPHSWSLQRH LVDFVVKNWR EPDEGIWEIR GPRRHFTHSK VMAWVALDRA VKAIEQFDLP GDLEGWSRAR EEIHTDVCEH GYNKQRQAFT QYYGADLLDA SLLMMPLVGF LPARDPRVVG TVEAIQRELV QDGLVYRYHP LRSGNVDGLP PGEGAFLPCS FWLVDCLKLI GREREAHELF ERLLGLRNGL GLLAEEYDPG HRRLVGNFPQ AFSHIGLINS AQNLSRGAVG PAAGRSSESE H
|
| |