Gene Oter_3323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_3323 
Symbol 
ID6205091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp4348291 
End bp4349211 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content66% 
IMG OID641692990 
Productprotein TolA 
Protein accessionYP_001820202 
Protein GI182415136 
COG category 
COG ID 
TIGRFAM ID[TIGR01352] TonB family C-terminal domain
[TIGR02794] TolA protein 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.554082 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.672074 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGCGA CCTCTCCCAG TGCCTTTTTG CTTTCGGCGA CGCTGCACGG CGTGCTCGCC 
GCGCTGGTGC TGTATTTCAC CTACGGGCTG AGCGACCGGA TGAAGGAGAA CCCGACGATC
TTCGAATTGG TCGCGGGCGA GGGCGACAAC TACATGGCGA CCGAAGCGCC GGCGCTCGGC
ACGCCGAGCG GGATCAAGTT GGCCATTCCG GAATTACCGC CGGCGAAGGC GGCGCCCGAG
CCGGTGCTCG CGCCACCACC GCCGCCCGAG CCGGTCATCC AGCGCGCGCC GGAGCGCAAG
GCGCCGGTGG TCGCCAAGGC GACGCCAGCG CCGGAAGAGG TGAAGATCCG GGATTTTTCG
AAGGACGTGA CTCGCATTTC CAACAAGCGG CAGGCGCGGT TGGAGGCGGC GGAGAAAAAG
CGCCGCGAAG CGGCGGAGCG GAAAGCGAAG GAAGAGGCGT TGAAGAGCCA GCGGATGACC
AAGGCCGATT TCGACCGCCA AAACAAAAGC AAGCCCAGCC CGAGCGCGAA AGGCGGCAGC
TCGGTCAAGG TGGCGCGGAT CGACGCGCAA GGAATTGCGA AAGGCGTCAT CGGTGGCTCG
ACCGCGAACA AGGTGGGCGG CGCCGGCGGC ACGGCACTCA CGCGGGCCGA AGGCGATGCG
ATCGACGCTT ATACCGCGTT GCTCGCGCGG AAGATCAAGA CGGAGCTCGA CGAGAAACCC
GGCGTCGGCG CCGGACTCAT CGTCGAGGTC GAAGTGCGAA TCCTCGCCGA CGGGACGCTC
ACCGGATTTC GGATCATCGA CTCGTCGGGC AGCCAGGAGT TTGATCAGGC CGTGCGGGAG
GCGTTTGCCA CTATGCAAAT GCCGCCCCGG CCCAAAGGCT TGTCGGAGCT GCAACGGTTC
CCGATTCGCG GCGTCGAGTA G
 
Protein sequence
MRATSPSAFL LSATLHGVLA ALVLYFTYGL SDRMKENPTI FELVAGEGDN YMATEAPALG 
TPSGIKLAIP ELPPAKAAPE PVLAPPPPPE PVIQRAPERK APVVAKATPA PEEVKIRDFS
KDVTRISNKR QARLEAAEKK RREAAERKAK EEALKSQRMT KADFDRQNKS KPSPSAKGGS
SVKVARIDAQ GIAKGVIGGS TANKVGGAGG TALTRAEGDA IDAYTALLAR KIKTELDEKP
GVGAGLIVEV EVRILADGTL TGFRIIDSSG SQEFDQAVRE AFATMQMPPR PKGLSELQRF
PIRGVE