| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3320 |
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| Symbol | |
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| ID | 6204533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 4344546 |
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| End bp | 4345481 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641692986 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_001820199 |
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| Protein GI | 182415133 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.478639 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAACTC CCCTTCTCCT CTGTGCCGCG CTCGCGATCG TTCCGCTCAC CACCGCCGCC
GAAAAAATCG CAATGATTCC GAAGGGTACC ACGCACAACT TTTGGAAATC GGTCGAGGCG
GGCGCGAAAA AGGCCGGCAC TGAGCTCGGC GTGGAAATCA TCTGGAAGGG TCCGCTGAAG
GAAGACGATC GCGCCCAGCA GATCGGCGTC GTGCAGCAGT TCGTCGCCTC CGGGGTGTCC
GGCATCGTGC TCGCGCCGCT CGACGACATC GCCCTGCGGG GCCCGGTGAA AAGCGCCGGC
GAGCGCAACA TCCCGGTGGT GATCTTCGAC TCGGCGCTGC GGGGCGAACC CGGCAAGGAC
TTCGTGAGCT TCGTTGCGAC CGACAACCGT CGCGGCGGCC GGCTCGGCGC GGAGGAGTTG
GTGCGGCTGC TCGACGGCAA GGGCAAGGTC GTTCTCCTGC GCTACGCCGA AGGCTCCGCC
AGCACGATCG AACGCGAGGC CGGCTTCCTC GAAGTCATCC AGCAGCACCC CGGCATCAAC
GTAATCGTCG ACAACCGCTA TGGCGGCGCC ACCACCTCAT CAGCGCAGGA CGCGGCGATG
AACCTGATCG ACAAGATCCG CGAAGCCGAC GGAATTTTTT GCGTCAACGA ATCCACCACG
CACGGCATGC TGCTCGCGCT CCGCCAGACC AATCTCGTCG GGAAAAAGAA GTTTGTCGGC
TTCGACACCT CCCCCGTCCT GCTCGCCGCG CTGCAGAAGG GCGACATTCA GGGTCTGGTC
GCGCAGAACC CGACCAAGAT GGGCTACCTC GGCGTCGTGT CCGTCGTGAA ACACCTGCGG
GGCGAGAAAG TGGATCCGGT GATCGACACC GGGTGCGTCC TCGTGACGCG GGAGAATATC
TCCACCCCTG CCGTGAAAGA GGTCTTGGGA AAATGA
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| Protein sequence | MRTPLLLCAA LAIVPLTTAA EKIAMIPKGT THNFWKSVEA GAKKAGTELG VEIIWKGPLK
EDDRAQQIGV VQQFVASGVS GIVLAPLDDI ALRGPVKSAG ERNIPVVIFD SALRGEPGKD
FVSFVATDNR RGGRLGAEEL VRLLDGKGKV VLLRYAEGSA STIEREAGFL EVIQQHPGIN
VIVDNRYGGA TTSSAQDAAM NLIDKIREAD GIFCVNESTT HGMLLALRQT NLVGKKKFVG
FDTSPVLLAA LQKGDIQGLV AQNPTKMGYL GVVSVVKHLR GEKVDPVIDT GCVLVTRENI
STPAVKEVLG K
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