Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_3318 |
Symbol | |
ID | 6205213 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 4341706 |
End bp | 4343325 |
Gene Length | 1620 bp |
Protein Length | 539 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641692984 |
Product | putative L-fucose isomerase |
Protein accession | YP_001820197 |
Protein GI | 182415131 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.491838 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAAAAC GCACTGTTCT TCTCGTCGCC AGTGGCGACC TGCGCCTCTC CGCGAACCAG CAATGCTGGC CGGCGCAGGC CGCGATGGAA AAGCAACTGA CCGCGGCCGT CGCCCGCCTC GGCTTCGAAC TGGTCCGCGC GCATCCTTAC AAGCCGAAGG AGCGCCACGG TTTCATCGCC TCGCAGAAGG AGGGCATGGA GGTTTTCGCC ACCCTCGATC CCAAGGCGCC ACTGATCGTC GCGGAGAGCG TCTGGCAATA CTCGCATCAC GTCCTCGCCG GATTGATCTC GCATCGCGGT CCGATCCTTA CCGCGGCCAA CTGGTCCGGC ACGTGGCCGG GTCTCGTTGG CATGCTGAAC CTCAACGGTT CCTTGACGAA GGCGGGTGTC GCTTACTCGA CGCTCTGGAG CGAGGACTTC ACCGATGAGT TGTTTACGCA CGGGCTCGCC ACGTGGTTGA AAACCGGTCG CGTCGTGCAC CCGACGACCC ACGTTCGGCC GCTCGCGAAA TGCACCGTGC CGGCAAAAGC GGCCACCGTC GCCCGCCGAC TCGCACAGGA GCTGCGCACG CGCAAGGCGA TCCTCGGCGT GTTCGACGAG GGCTGCATGG GCATGTTCAA CGCGATCATT CCCGACGAAC TGCTTTTCTC CACCGGGGTG TTCAAGGAGC GGCTCTCCCA GTCCGCGCTC TACTATGCCG CGACGCAGGT GCCCGAGGAT GAAGCCCGTA CCGTCTACGA ATGGCTGCAG AAGAAGGGGC TGAAGTTTCA CCTCGGCCAT CGCGAGGCCA CCGAGCTCAC CGAGGATCAG GTGCTCTGGC AGTGCCGCAC CTACATCGCC GCACTGCGGA TCGCCGACGA GTTTGGCTGT GACGCCATCG GCATCCAATA CCAGCAGGGA TTGAAGGACC TCTTGCCCGC TTCCGACCTC GTCGAGGGCC TGTTGAACAA TTCCGATCGT CCGCCCGTCC GCAACGCCGC GGGCCGCGTG ATCCGCGCGG GCGAGCCGCT GCCGCATTTC AACGAGGTCG ATGAATGCGC CGGACTCGAC GGACTGCTCA CACACCGCGT GCATCGCGCG CTGGGCCAGC CAGTCGAGAA CACGCTCCAC GACCTCCGCT GGGGCGACGT CGATCGCAGC GGTTCAATCC CGGATTACGT GTGGGTATTC CTGATTTCCG GGGCCACGCC GCCCGCGCAT CATGTCGGCG GCTACAAGGG CAGCGACTCG CACCGCCAGC CGGCGATGTA TTTCCGGCTC GGCGGCGGCA CGCTGCGCGG AGTTGCCAAA CCCGGCGAGA TTGTGTGGAG CCGGATCTTC GTCGAAGCCG GCAAGCTCAA GATGGACCTC GGCCGCGCGA GGGCCGTCGC CCTGCCCCGC GAAGAAACCG AGCGCCGCTG GAAACTCACC ACGCCGCAGT GGCCGATCAT GCACGCGGTC ACCTACGGCG TGTCGCGCGA CCAGATGATG GCCCGGCACA AGGCGAACCA CATCCAGGTC GCCTACGCCC GGAGCGCCCG CGAAGCCGAT CTCGCACTCT ACACCAAGGC CGCGCTCGCC CGCGAACTCG GGCTCGAAGT CGCGCTCTGC GGCACCCGCG CCGACGGATC GAAGTTCTGA
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Protein sequence | MPKRTVLLVA SGDLRLSANQ QCWPAQAAME KQLTAAVARL GFELVRAHPY KPKERHGFIA SQKEGMEVFA TLDPKAPLIV AESVWQYSHH VLAGLISHRG PILTAANWSG TWPGLVGMLN LNGSLTKAGV AYSTLWSEDF TDELFTHGLA TWLKTGRVVH PTTHVRPLAK CTVPAKAATV ARRLAQELRT RKAILGVFDE GCMGMFNAII PDELLFSTGV FKERLSQSAL YYAATQVPED EARTVYEWLQ KKGLKFHLGH REATELTEDQ VLWQCRTYIA ALRIADEFGC DAIGIQYQQG LKDLLPASDL VEGLLNNSDR PPVRNAAGRV IRAGEPLPHF NEVDECAGLD GLLTHRVHRA LGQPVENTLH DLRWGDVDRS GSIPDYVWVF LISGATPPAH HVGGYKGSDS HRQPAMYFRL GGGTLRGVAK PGEIVWSRIF VEAGKLKMDL GRARAVALPR EETERRWKLT TPQWPIMHAV TYGVSRDQMM ARHKANHIQV AYARSAREAD LALYTKAALA RELGLEVALC GTRADGSKF
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