| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3307 |
|---|
| Symbol | |
|---|
| ID | 6208557 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 4331585 |
|---|
| End bp | 4333138 |
|---|
| Gene Length | 1554 bp |
|---|
| Protein Length | 517 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641692973 |
|---|
| Product | propionyl-CoA carboxylase |
|---|
| Protein accession | YP_001820186 |
|---|
| Protein GI | 182415120 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG4799] Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.448446 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCATCT CTCCCGCCCT CCTCAAACAG CTCGAGGAAA AACGCCAGGT CGCGTACGCG
GCCGGCGGCG CCGCGAAGCT CGCGGAGCGC AAAAAGAAGG GCCTCCTGTC CGCTCGCGAG
CGGCTCGAGG CGCTCTTCAC GCCCGGCACG TTCATGGAAT TCGGCCTGCA TGCCCAGCAT
GCGTGCCACG ATTTCGGTCT CGAAACCAAG TCCTTCCCCG GCGACGGCGT CATCACCGGC
GTCGGCTATG TCGACGGCCG GCCCGTCGCG GCGTTTTCCC AGGACTTCAC CGTCGGCGGC
GGCGCGCTCG GCCGCATCCA TTCGAAGAAG ATCAGCGATC TCTACGACTA CGCGATGCAG
TCCGGCATGC CCGTGATCGG CATCAACGAC TCCGGTGGCG CGCGCATCCA AGAGGGCGAT
GAGTCGCTCT CCGGCTATGG CCAGGTGTTC TACCGCAACG TTCTCGCGTC CGGCGTCATT
CCGCAGATTT CGATCATCGC GGGCTCCTGC GCCGGCGGCG CGGCGTATTC GCCCGCGCTG
ACCGACTTCC TCATCATGAC CCGGAAGAAC GCGCAGATGT TCATCTGCGG CCCCGAGGTC
ATCAAGGCGG CCACCGGGCA GGAAGCCTCG CTCAGCCAGT TCGCCACGGC GGAAGCGCAT
GCGAGCGTCA GCGGCAACGT GCATTTCATC GCCGAAAACG AAGGGGACGC GATTGCGATC
ACGAAAAAGC TCTTCTCGTT TCTGCCCTCG AACAACGTGA TGGATCCGCC GCACCGGCCG
ACGCCGGTAA TCTCGCTCGA GAGCGACGCG GCGATGAATG AGATCATCCC CGAGGATTCG
AAAGCGCCGT TCGATGTACA CCAGGTCATC GCCCGACTGG TGGACGACGC CGATTTCCTC
GAGGTGCATC GCGACTTCGC CAAGAACCTC GTGGTCGGCT TCGCGCGCAT CCAGGGTCTG
GTCGCGGGTA TCATCGCCAA CAATCCCGCG GTGAAGGCCG GCACGCTCGA CATCGATTCG
TCCGACAAGG GCGCGCGCTT CATCCGGTTC TGCAACGTCT TCAACATCCC GGTCGTCACG
CTGGTCGACA TTCCCGGCTT CATGCCCGGG CTCGCGCAGG AGCGCGGCGG CATCATCCGC
CACGGCGCGA AGATGCTCTT CGCCTATGCC TCGGCCACGG TGCCGAAGAT CACCGTGATC
ATGCGCAAGG CCTACGGTGG CGCCTACCTC GCCATGTGCA GCGCCGACAT GGGCGCCGAC
ATGGTGTTCG CCTGGCCTTC CGCCGAGATC GCCGTCATGG GCGCGGAAGG CGCGGTCAAG
GTGCTCTTCA AAAAGGAAAT TGCCGCCGCG TCCGACCCGA AGGCCAAGGA AAAGGAACTC
GCCGCGGAAT ATCGGGAAAA GTTCGCCTCG CCCTATGAAG CCGCCGCCAA GGCGATGGTC
ACCGATGTGA TTGAACCCGC CCAAACCCGC GGCATGGTCG CGATGGCCCT GCGTAACACG
CTCTCGAAGC GCGAAACGCG CCCGCCGAAG AAGCACGGCA ATATTCCTCT ATGA
|
|---|
| Protein sequence | MAISPALLKQ LEEKRQVAYA AGGAAKLAER KKKGLLSARE RLEALFTPGT FMEFGLHAQH
ACHDFGLETK SFPGDGVITG VGYVDGRPVA AFSQDFTVGG GALGRIHSKK ISDLYDYAMQ
SGMPVIGIND SGGARIQEGD ESLSGYGQVF YRNVLASGVI PQISIIAGSC AGGAAYSPAL
TDFLIMTRKN AQMFICGPEV IKAATGQEAS LSQFATAEAH ASVSGNVHFI AENEGDAIAI
TKKLFSFLPS NNVMDPPHRP TPVISLESDA AMNEIIPEDS KAPFDVHQVI ARLVDDADFL
EVHRDFAKNL VVGFARIQGL VAGIIANNPA VKAGTLDIDS SDKGARFIRF CNVFNIPVVT
LVDIPGFMPG LAQERGGIIR HGAKMLFAYA SATVPKITVI MRKAYGGAYL AMCSADMGAD
MVFAWPSAEI AVMGAEGAVK VLFKKEIAAA SDPKAKEKEL AAEYREKFAS PYEAAAKAMV
TDVIEPAQTR GMVAMALRNT LSKRETRPPK KHGNIPL
|
|---|
| |