| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3305 |
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| Symbol | |
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| ID | 6207719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 4328823 |
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| End bp | 4330943 |
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| Gene Length | 2121 bp |
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| Protein Length | 706 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641692971 |
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| Product | methylmalonyl-CoA mutase, large subunit |
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| Protein accession | YP_001820184 |
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| Protein GI | 182415118 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain
[TIGR00642] methylmalonyl-CoA mutase, heterodimeric type, beta chain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.457427 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGACC TACCTACGTC ATCCCAAGTC TCTGCCGATC CCCTCGCGGC CGCGCTCGCG
CGCTGGCGTG CGACCGTGGA CGCCGAACTG AAGGGTGCGT CCTTCGAGAA GAAGTTCGTC
ACCCGGACGT TCGAGGGAAT TTCCCTCCAG CCGCTCTACA CGCGGGCAGA CCTCGCCGGA
GTGCCGCATC TGGGCACCGC GCCGGGCGCC GCGCCCTTCC TGCGCGGCAC GCGGAAGCAA
GGCTACAAGG ACAAGATCTG GCGTATCGCG CAGGAGTCCA CCGCCTCGGA CGCTGAGGCG
TTCAACACCG CGATCCGGCA GGATTTGGCC GCCGGGCAGG ACGCGGTCGT GCTGCGACCG
GATCTGGCGA GCCGCGCCGG TCGCGATCCC GACGCCGCCC GGCCGGAGGA ACTCGGAGTC
GACGGCGTCT CGCTCGCCAC GCTGGACGAT CTCAACACGG CATTGAAGGA CGTCGATCTC
ACCGCTGTGC CCGTGAATGT GCAGACGGGA GCTGACGCGC TGCCGATCGC GGCGCTCTAT
CTGCAGCACG CCAAAATCCG CGGGGTCGAC TGGACCCGGC TGACGGGTGC CGTGAGTGCG
GATCCGCTTG GCGAATGGCT CGCGCGCGGC GAACTGCCGA CGACGCTCGA GGAACTCTAC
GACAACCTGG CCGCGTGGAC CAAGTGGGCC GGCAATCACG CGCCGGCGCT GCACACGATC
GGAGTCAACG CGGCGATGTG GGGCGAGGCC GGCGGCACGG CGACGCAGGA ACTGGCGTTC
GCGCTGGCCG CGGCGGCCGA GTACCTGCGC GCGCTTTACC GGCATGGCTT GCGCAGCGAG
TCGGTCGCCA CGCGGATGAG CTTCCGGTTC GCGATCGGGC CGCAGTTCTT CACCGAGATC
GCGAAATTCC GCGCCTTCCG TCCGCTCTGG ACGCGCGTGG TGACGGCGTT TGGTGCGACC
GCCGACACGG CGGCCGGGGC GAGCGTGCAC GCGGTCACCG GGCATTGGGA CAAGACGCTG
CTCGACCCGC ACGTCAACCT GCTGCGAGTC ACCACCGAGG CGCTGTCCGC GGTGCTGGGC
GGCTGCGACA GCCTGCACAT CGCGCCGTTC GACGAGGTGG CCGGAAGCTC GGACGAGTTT
TCCCGCCGGA TCGCGCGCAA CGTGCACACG CTGCTCGCGG AGGAATTCAG CTTCGCCGAG
ACCGCGGATC CCGCCGGCGG CTCATGGTAT GTCGAAAAGC TCACCGACAC GCTCGCGCGC
AACGCGTGGG CGCTGTTCCA GGACATCGAG AGCAAAGGTG GGCTCACCGC CGCGCTCCGC
GCCGGCTACC CGCAGCAACT GGTCGCGAAA GCGGCCGGAG AAAAGGCGGA CGCGATCGCG
AAACGGCGGC TCGGGTTGGT GGGCACGAAC CTGTTCCCGA ATCTGAAGGA GAAACCGCTC
GCGCCGGTTT CCGTGGATAC GAACGTACGC GCCGCCGAGC TCGTTGCGCG CGTGCGGGCC
CGTCGCCGCG GGCCGCAGTC GCCGGCGCCG ATCTCCGATT GGAATGCGCG GTTCAACGCC
GCGCTGGCCG CGGCGCGCGA CGGCGCGACC GTGGGCGAAT TGAGCCGGAT GGCCCAGGCG
AGTGCGACCG GCGAAGGCGC GATCACTCCG GTGGTCGCAC GCCGCGCCTC CGAGGCGTTC
GAACAGCTCC GCGCGGCCTC CGCCGCGTTC GCGGCGAAAA CCGGGGCGCG GCCGAAGGTC
TTCCTCGCGA AAATGGGGCC GGTCCTGCAG CACAAGGCCC GCGCCGATTT CTCGGCCGGC
TTCTTTGCCG TCGGCGGCTT CGAGTCGATC GGCAAGCAAA GCTTCGAAAC GCCGGAAAGC
GCGGCCGCGG CCGCGGTGGC GTCCGGCGCC AAGATCGCGG TGCTATGCTC GACCGATGAC
ACGTATCCGG CGCTCGTGCC GGTGTTCGCC AAGGCGGTGA AAGCCGCCGC GCCGAAGACG
ACCGTGGTGC TCGCCGGACT GCCCGCCGAC GCGGCGGTCG TCGCCGCGTT CCGCGAAGCG
GGCGTCGACG AGTTCATCCA CATTCGCGCC AACGTCTACG AACTCCTGGC CAAGTTTCAG
AAGCAGATCG GAGCCCTGTA A
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| Protein sequence | MPDLPTSSQV SADPLAAALA RWRATVDAEL KGASFEKKFV TRTFEGISLQ PLYTRADLAG
VPHLGTAPGA APFLRGTRKQ GYKDKIWRIA QESTASDAEA FNTAIRQDLA AGQDAVVLRP
DLASRAGRDP DAARPEELGV DGVSLATLDD LNTALKDVDL TAVPVNVQTG ADALPIAALY
LQHAKIRGVD WTRLTGAVSA DPLGEWLARG ELPTTLEELY DNLAAWTKWA GNHAPALHTI
GVNAAMWGEA GGTATQELAF ALAAAAEYLR ALYRHGLRSE SVATRMSFRF AIGPQFFTEI
AKFRAFRPLW TRVVTAFGAT ADTAAGASVH AVTGHWDKTL LDPHVNLLRV TTEALSAVLG
GCDSLHIAPF DEVAGSSDEF SRRIARNVHT LLAEEFSFAE TADPAGGSWY VEKLTDTLAR
NAWALFQDIE SKGGLTAALR AGYPQQLVAK AAGEKADAIA KRRLGLVGTN LFPNLKEKPL
APVSVDTNVR AAELVARVRA RRRGPQSPAP ISDWNARFNA ALAAARDGAT VGELSRMAQA
SATGEGAITP VVARRASEAF EQLRAASAAF AAKTGARPKV FLAKMGPVLQ HKARADFSAG
FFAVGGFESI GKQSFETPES AAAAAVASGA KIAVLCSTDD TYPALVPVFA KAVKAAAPKT
TVVLAGLPAD AAVVAAFREA GVDEFIHIRA NVYELLAKFQ KQIGAL
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