| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3292 |
|---|
| Symbol | |
|---|
| ID | 6204410 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 4309755 |
|---|
| End bp | 4310183 |
|---|
| Gene Length | 429 bp |
|---|
| Protein Length | 142 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641692958 |
|---|
| Product | signal transduction protein |
|---|
| Protein accession | YP_001820171 |
|---|
| Protein GI | 182415105 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2524] Predicted transcriptional regulator, contains C-terminal CBS domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.792405 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATCC GGGAAATGAT GACGAAGGAA ACGCGCTCGG TTTCGCCTGA CACGCCCGTA
ATCGAAGTGG CGGGGTTGAT GCGCCTGCAC GACATCGGCG TCGTCCCCGT GGTCGAAGAC
GGCCGCATCG TGGGCATGCT GACCGATCGC GATATCGTGC TGCAAGTGGT GGCCGACGGT
GACGATCCGC GCAGCACGGT CGTGCGTGAT GTGATGTCCA CCGGCTCGAT CTCGGTGAAC
GAAAACCAGG AAGTCGACGA AGCCGTCGCG CTCATGGAAA AATACCAAGT CCGTCGGCTG
CCCGTGCTCA ATGCGGATTC CAAACTCGTC GGGATCGTGT CGCTCGGCGA TATCGCCGTC
GATGTTCACG CAGGCTTGTC GGGCAAGGTG CTGAAGGAAG TCTCCGAACC CGCGGCGCCA
CGGTTGTAG
|
|---|
| Protein sequence | MKIREMMTKE TRSVSPDTPV IEVAGLMRLH DIGVVPVVED GRIVGMLTDR DIVLQVVADG
DDPRSTVVRD VMSTGSISVN ENQEVDEAVA LMEKYQVRRL PVLNADSKLV GIVSLGDIAV
DVHAGLSGKV LKEVSEPAAP RL
|
|---|
| |