| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3275 |
|---|
| Symbol | |
|---|
| ID | 6204960 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 4291151 |
|---|
| End bp | 4292497 |
|---|
| Gene Length | 1347 bp |
|---|
| Protein Length | 448 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641692941 |
|---|
| Product | glycosyl transferase group 1 |
|---|
| Protein accession | YP_001820154 |
|---|
| Protein GI | 182415088 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.37662 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.10693 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCAAT CGATCCTGCA AGCCGACAGC CCGCTCCCGC GTATCGCGAT GATTTCCACC
CACGGTTATG TGGCCGCTGT GCCGCCCCTC GGCGCGGCCG ATACGGGCGG GCAGGTCGTC
TACGTGCTGG AACTGGCGAA AAAGCTGGCG CAGCTCGGCT ACGAGGTCGA CATCTGGACG
CGGCGGTTCG AGGACCAGCC GGAATATGAC GTCGTGAACG AGCGCGTGCG CGTGATCCGG
GCGCGTTGCG GCGGCCGGGA GTTCATCCCG AAGGAATACC TGGTCGAGCA CCTGCCGGAG
TGGAACGAGC ATGCGCTGCG CTTCATCCAG CGGCACAAGC TCAACTACAG TTTCATCAAC
AGCCACTATT GGGACGCTGG CGTCGCCGGC CAGCACCTCA GCGAGGTGCT CGACGTCCCG
CACGTGCACA CGCCGCATTC GCTCGGGCTG TGGAAACAGC GGCAGATGGA GCGCGACTAT
CCCGACGACA GCGGCAAGTT CGAGAAACAA TACAACTTTC GCCGGCGCGT GCACGAGGAG
CGGAAGCTTT ATCTCGACTG CCATCTGGTG GTCGCGACCA CGCCGCCGCA GCTCGACTTC
CTGATCAACG ATTATGGCGT GCCGGCGGAG AAGGTGCGCA TGGTGCCGCC CGGGTACGAC
GACAATCGCT TCTACGCGGT CGGCGACGCC ACCCGGCAGG CGATTCGAAA CCGGCTGGGC
TTCAGCGGCT CGGTCGTGCT CGCGCTCGGC CGGCTCGCCC GCAACAAGGG CTACGATCTG
CTGATCGACG CGTTCAGCCT GGTCGCGCAG CGGGAGCCGA CAGCGAACCT CCATCTCGCC
ATCGGCGGCG AGGACCTGAA CGAGTTCGAG ACGAAGCTGC TCGCGGAATA CCAGGCGCTC
GCGGCGCAAT CACCCGCGGC GGACCGGATC AAGTTCGGTT CGTTCATCAC CGAAGAGGAA
TTGCCCGACT ATTATCGCGC GGCGGACATG TTCGTGTTGT CGAGCCGCTA CGAACCGTTC
GGCATGACGG CGATCGAGGC GATGGCTTCA GGCACGCCGA CGGTGGTGAC GGTGCACGGC
GGACTGTATC GCGCGCTCTC CTTCGGGCGG CACGCGCTGT TCGCGGATCC GTTCGATCGC
GAGGATCTCG GCATCACCAT GGCGAAAATC TTCCGCCATC CGCGACTGCG CGGGCGTTTG
TCCCGCATGG GCGCGCACAA GGCGCGGAGT CTGTTCACGT GGACCGGCAT CGCGCAGCAG
CTCGTGGCCG CGGTCGAACA TCGTCCCTCG ACCACGGTGA CCCTCGACGA CAAGGAGTGG
GACGAGCCGT GGAATGACAA CGATTGA
|
|---|
| Protein sequence | MTQSILQADS PLPRIAMIST HGYVAAVPPL GAADTGGQVV YVLELAKKLA QLGYEVDIWT
RRFEDQPEYD VVNERVRVIR ARCGGREFIP KEYLVEHLPE WNEHALRFIQ RHKLNYSFIN
SHYWDAGVAG QHLSEVLDVP HVHTPHSLGL WKQRQMERDY PDDSGKFEKQ YNFRRRVHEE
RKLYLDCHLV VATTPPQLDF LINDYGVPAE KVRMVPPGYD DNRFYAVGDA TRQAIRNRLG
FSGSVVLALG RLARNKGYDL LIDAFSLVAQ REPTANLHLA IGGEDLNEFE TKLLAEYQAL
AAQSPAADRI KFGSFITEEE LPDYYRAADM FVLSSRYEPF GMTAIEAMAS GTPTVVTVHG
GLYRALSFGR HALFADPFDR EDLGITMAKI FRHPRLRGRL SRMGAHKARS LFTWTGIAQQ
LVAAVEHRPS TTVTLDDKEW DEPWNDND
|
|---|
| |