Gene Oter_3244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_3244 
Symbol 
ID6204235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp4248587 
End bp4250092 
Gene Length1506 bp 
Protein Length501 aa 
Translation table11 
GC content71% 
IMG OID641692910 
ProductO-antigen polymerase 
Protein accessionYP_001820123 
Protein GI182415057 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.555329 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.922939 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGACGC TCAACCAGAC TCGCGCTGCG TTGCTGGCCG ACGCGTTGCG CGCGGTCAGT 
GCGGTCGTGC TGCTCACCAC GCTTTTCCTC GCTCCCTTGA ACTACGGCTC CACCCGCCCG
CTGCCTTTCG AAACCCTGAT CGCGCTCTGC GCGATCGGCG GCGGCGCCTG GCTTCTCGCC
GGCGCCTTCG TGGGGGCGTG GTCCCTGCCG CCCTGGCCGG CGCAACTCGG GATCGGATTA
ATTATGCTCG CCGGCGCGGC TTGGCTGTTG GTGCTGGCGC CGCCGGACGT GCCGGCGTTC
ACGCACGCCC ATTGGGGCCG GATCGCGCGG CGGTGGCCGC ACAGCGTCGT GCCGCGCGAA
TTCGGCTTGC TGCTCGCATG GGCCGCGGCC GGCGCGCTTG GCTTTCTGGC GTTTTGCGAT
CTCGCCCGCG ACTTCATTTG GCGGCGGGCC ATCGCGGCGG TCATTCTGGT CGCGGGTGTC
GCCGTGGCGA CGCTGGGGTT GCTGCAGAAC GCGACCGGCG CCCGTGGAAT CTTCTGGGAA
CACGTGGCCC GGATGCCGGG CACATTCTTC GGACCGTTCT ACCACCACAC GTCTGCCGGC
GCCTACCTCA ACCTGGTATG GCCGATGGGG CTGGCGCTCG CGCTGACCGG TCTGCAGCGG
CCGCACGGCA GCGCCCGGCT GCGCGCGGTG ATCTATGGCT CCCTCGCCGG CGTCACCCTC
GTGCTGGTGG CCCACGTCGC GCACGTTTCG CGCTTTCCCC AGGTGATCGC GCTCGGCGCG
CTTGTGGGCT TCGCGGTCTG GAGCGGAGCA TGGACCCTGC TGGGCCGGAT TCGGCATCTG
CGCTGGGCGC TCGGCGCGCT CCTCGTGGCG CTGGTGCTGG GCCTCACGAT GTTTGGCGGC
GGCCGCGCCC ACCGGATCGC GGAACGCTGG CAGCTCCTGC GCGTTGAGGG TCTCATGGGG
GGACGGCCCG CGGTCGCCCC CGCCCCGCCC GCCGACTGGC CGCGGCTGAT GCGGGACGAT
TTGTTCGTGC CTTCGGATCA CCGCCAGTAC CCGCTCGGCG ATCGCGGCGC GGCTTATGCC
ACCGCGCTCG CGGCCGTGGC GGATCGGCCC TGGTTCGGCT GGGGGCCCGG CGGCTGGACC
GCGGCGGCGG CGGCGCACTC GGTCGATCCG TTCATCCGCA CCTTCTTCCT CTACCTTCAG
TTCACGCACA GCGATTACCT GCAAACCGTC GTGGAATGGG GCCTCATCGG CGCCACCGGC
TGGCTGTTGG TGCTGCCCGC CGCCGCGCTG CACGCCTTCG TCCGCCTGAG CCGCCAACCC
GCGCGGGATG TGCTGGGCGC CGGCGCCGCC GTCGCCCTGA GTACCGTGCT CGTGCAGGCG
ACCATCGATT TTCCCCTGCA GATTCCGGCG CTTCTGTTCA CCGCGCTCGC CCTCGCGGCG
GTGGCTTGGA CGGTTCCCGG CGCACGAATT GCCCAGATTG CTGTCTCTCC AACTTCTCTG
ACATGA
 
Protein sequence
MKTLNQTRAA LLADALRAVS AVVLLTTLFL APLNYGSTRP LPFETLIALC AIGGGAWLLA 
GAFVGAWSLP PWPAQLGIGL IMLAGAAWLL VLAPPDVPAF THAHWGRIAR RWPHSVVPRE
FGLLLAWAAA GALGFLAFCD LARDFIWRRA IAAVILVAGV AVATLGLLQN ATGARGIFWE
HVARMPGTFF GPFYHHTSAG AYLNLVWPMG LALALTGLQR PHGSARLRAV IYGSLAGVTL
VLVAHVAHVS RFPQVIALGA LVGFAVWSGA WTLLGRIRHL RWALGALLVA LVLGLTMFGG
GRAHRIAERW QLLRVEGLMG GRPAVAPAPP ADWPRLMRDD LFVPSDHRQY PLGDRGAAYA
TALAAVADRP WFGWGPGGWT AAAAAHSVDP FIRTFFLYLQ FTHSDYLQTV VEWGLIGATG
WLLVLPAAAL HAFVRLSRQP ARDVLGAGAA VALSTVLVQA TIDFPLQIPA LLFTALALAA
VAWTVPGARI AQIAVSPTSL T