| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3236 |
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| Symbol | |
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| ID | 6204455 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 4234985 |
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| End bp | 4236529 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641692903 |
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| Product | tetratricopeptide TPR_4 |
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| Protein accession | YP_001820116 |
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| Protein GI | 182415050 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.789976 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.265917 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAAGAGC TCGGGCGGCT GTACCATGCC AACGGCTACA CGCCGGAGGC CGAGGCGTGC
TGGCGGCTGC TCTGTGCGCG CCGACCGGAT GAACCGCGCT GGTGGTACTA CCGCGCGGTG
CTCCGGTTGG CGGACAACGA CTATGACGCG GCGACGACGC TGCTGCGGGA AACCCTGTCG
CGTGCCCCCG ACTATTCGCC CGCTTACCTG CAGCTGGCCA ACCTGCAGCT CAAGACCGGC
GAACTGGAAG GGGCGGAGCG CGACTACCAG CGTCGCCTGG CATTGGTGCC GCGAGACCCC
TACGCCCGGC TCGGGCTGGT CCGGCTGGCG CTGCTCCGGC AGCGCACCGG CGAGGCCCGT
GGTTTGCTGG AGGAACTGCT CAAAGACGCA CCGAACTTTT CCACCGCGCA CAGCCTCTAT
GCGGAGATTC TGGCCGGAGC CGGCGACGAA AAGCGGGCCA GCTGGCACCG GTGGCTCGGG
GTGGAAACCA TCCGTTACAC CGAGCCGGAG GATTCCTGGC TGGAGGAGTT GGAGCCATGG
TGCCACGACT ACGACCGGCT CTGCGTGCTC GGCTCGGTTG AGTCGATGCG CGAACATCGT
GACCGGGCGC GAGCGCTCTT CGAGCGGGCG ATCCAGGTTA ATCCCGCCGC GTTCGACGCC
TATCAGCTCC TGAGTGCGTT GTACTTCAAA CAGGAGCAGC CGGCGCAGGC GCGCGACCTG
CTGGAACAGG CCCGCCCGCG GCTCGCGCCG GCGAATCCCA CGGCGTGGTT CACGTACCTT
TGCCGCGCCT ACCGGCTGTT GGGCCAGCCG GCTGAAGCCG AGCGGGTGGC CCGGGAGGGG
CTCGCGTTGA AGAGCGACAG CCCGGAGTTG CTCGAGGCGC TGGGCCTCGC GCTCGCCGAC
CTGGGCCGGC ACACCGATGC GGTTCCGGCC TACGAAACGG CGCTCGGGCG CAATCCGAAC
GATGCCAGCA TTAACTACAA TCTCGCGGTT TCGCTCCTCG CGTTGCGCCG GTTGGACGAC
GTGCTGGCGG CGCTCGACCG TTCGCTCACC TTGCAGCCGG CCTTTCCCCC CACGCTGCTT
CTGCGGGCGC GAATCGAAAT GGCCGCCGCG CATTGGCCGG AAGCCGAGAC GTACCTGCGG
CCGCTGATCG AGTCGCACCC CGACGACGCC GAGGCGCGCC GGCTGTTTGC GGAGTGGCAC
CAACACATGG GCGCAGCGGC GGAGAAACGC GGCGAACCCG CGGAGGCCGA GCGGTATTAT
CAGAGCGGAC TCGCGCTTGA TCCGAACGCG GCTGAGCTCC ACGTCAGGCT CGGCGCCTTT
TACCTCGTGC ACCGCCGCTT CGCCGACGCG ATCCAGCCAC TGGAGGCGCA TCACCGGCTG
CAGCCGGAGA GCGCGCCGGG CTGCCTGTTT CTCGGCCAGG CGTACGCGGC CACTGGACGC
CGCGACGAGG CACGCGAAGT CCTGAAGCAG GGGGAGGAAC TGGCGGGCCG TGCGGGCAAC
GCCCGCACCG CGCGGGCGTG CCGGGAACTC CTGGAACGGC TGTGA
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| Protein sequence | MEELGRLYHA NGYTPEAEAC WRLLCARRPD EPRWWYYRAV LRLADNDYDA ATTLLRETLS
RAPDYSPAYL QLANLQLKTG ELEGAERDYQ RRLALVPRDP YARLGLVRLA LLRQRTGEAR
GLLEELLKDA PNFSTAHSLY AEILAGAGDE KRASWHRWLG VETIRYTEPE DSWLEELEPW
CHDYDRLCVL GSVESMREHR DRARALFERA IQVNPAAFDA YQLLSALYFK QEQPAQARDL
LEQARPRLAP ANPTAWFTYL CRAYRLLGQP AEAERVAREG LALKSDSPEL LEALGLALAD
LGRHTDAVPA YETALGRNPN DASINYNLAV SLLALRRLDD VLAALDRSLT LQPAFPPTLL
LRARIEMAAA HWPEAETYLR PLIESHPDDA EARRLFAEWH QHMGAAAEKR GEPAEAERYY
QSGLALDPNA AELHVRLGAF YLVHRRFADA IQPLEAHHRL QPESAPGCLF LGQAYAATGR
RDEAREVLKQ GEELAGRAGN ARTARACREL LERL
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