| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3226 |
|---|
| Symbol | |
|---|
| ID | 6204218 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 4213150 |
|---|
| End bp | 4214727 |
|---|
| Gene Length | 1578 bp |
|---|
| Protein Length | 525 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641692893 |
|---|
| Product | carboxylesterase |
|---|
| Protein accession | YP_001820106 |
|---|
| Protein GI | 182415040 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2272] Carboxylesterase type B |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.114767 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0637865 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGACTC CCCTGCTTCG TTTCGCGTCG CTGCTGGCGC TCATGCCGGT GTGCTTCCTG
ATCGCCGCCG ACGGACCTGC CGACCGGCCC GCGCCCGTGT TGACCGAATA TGGACTCGTG
CAGGGCGCCG CTGAACAGGA CCTGACGGTC TATCGCGGCA TCCCGTTTGC CGCGGCGCCG
GTGAGTGAAC TTCGCTGGCG CGCGCCCCAC CCCGCCGCCA AATGGGACGG CGTGCGCGAG
ACGACGAGCT TCGCCGCCGA TCCCTACCAG GGTGACGGCA AGGGAAACGT GAGCGAGGAC
TGCTTGTACC TGAACATTTG GACGCCTGCT AAATCCGCCC GCGAGCGGTT GCCGGTGCTC
GTCTGGATTT ACGGCGGCGG ATTCTCGTTC GGCTCCACCT CCACGCCCGT CCACAACGGC
GAGCACCTCG CGCGCAAAGG CGTCGTACTC GTTACGCTCA ATTACCGCGT CGGCCCGCTT
GGTTTCCTCG CCCATCCGGA ACTCAGCGCC GAATCCCCGC ATCACGTTTC GGGCAACTAC
GGGCTGCAGG ACCAGATTGC CGGCCTGAAG TGGGTGAAGA AAAATATCGC GGGCTTCGGC
GGCGACCCGG AGCGCGTGAC GATCTTCGGC GAGTCCGCCG GCGGCATTTC CGTCTCCATG
CTCTGCGCCT CGCCCGAGGC GAAGGGGCTG TTCCGCGGCG CGATTTCCCA AAGCGGTGGT
TCGTTCGGAC CGGTGCGGGT GACCACCTAT CCCGGCGAAA ACATGCGCGG CCTCGCTGAC
GCCGAGCAGG CCGGCGTCGC TTACATGAAG AAGGCCGGCG CGGCCTCGAT CGCCGAGCTC
CGCCAACTCG CGCCCGACAA GCTGCCCGCC GGTTGGGGCA GCGGCGCTGC GTGGCCGATC
GTCGACGGCT GGGTGATCCC CAATGACCAA TACAAGCTCT ACTCCGCCGG CCGTTACAAC
CAGGTCGACA TCCTCGTCGG CTACAACTCC GACGAGGGCC TGAGCTTCTC GCGTGAGAAG
ACGCCCGACG AGTTCATCGC CGGCGTGAAG GCGCGCTACG GCAAGTTCGC CGACGACCTG
CTCAAGGTCT ATCCCGTCGG GACCGACTCC GTCCCGAAGA CCGCCCGCGA CCTCATGCGC
GACGCCGCCT TCGGCTGGCA CACGTGGGCC TGGGCCACGT TTCAAGCGCG GGCCGGCGAC
TCGAAGGTCT TCTATTACTA CTTCGACCAA CACGCCGAGC ACCCGGCGGG CTCGCCCGAG
GCCGACCACG GCACGCCGCA CGGCGTCGAC GTGCCCTACG TTTTCCAGAC GCTCGATCCC
AAGAACCCGA ACACGACGCC CGCCGACCTC GCGATGTCGG ATCTGCTCTC GACCTACTGG
ACGAATTTCG CCAAACGCGG CGATCCCAAC GGCGCCGGCG TCCCCGCGTG GCCACGATTC
ACCGATGGCG ATCGCCGCGT GATGTATTTC CACAACGGTG CCACGGTTGG CCCGGTCCCC
AGCGCCGATG CGCTCGCTGT GCTCGACCGC TACTTCGCCT GGCGCCGGAC GCCCGAGGGC
GAAGCCGCTT CGAAATGA
|
|---|
| Protein sequence | MKTPLLRFAS LLALMPVCFL IAADGPADRP APVLTEYGLV QGAAEQDLTV YRGIPFAAAP
VSELRWRAPH PAAKWDGVRE TTSFAADPYQ GDGKGNVSED CLYLNIWTPA KSARERLPVL
VWIYGGGFSF GSTSTPVHNG EHLARKGVVL VTLNYRVGPL GFLAHPELSA ESPHHVSGNY
GLQDQIAGLK WVKKNIAGFG GDPERVTIFG ESAGGISVSM LCASPEAKGL FRGAISQSGG
SFGPVRVTTY PGENMRGLAD AEQAGVAYMK KAGAASIAEL RQLAPDKLPA GWGSGAAWPI
VDGWVIPNDQ YKLYSAGRYN QVDILVGYNS DEGLSFSREK TPDEFIAGVK ARYGKFADDL
LKVYPVGTDS VPKTARDLMR DAAFGWHTWA WATFQARAGD SKVFYYYFDQ HAEHPAGSPE
ADHGTPHGVD VPYVFQTLDP KNPNTTPADL AMSDLLSTYW TNFAKRGDPN GAGVPAWPRF
TDGDRRVMYF HNGATVGPVP SADALAVLDR YFAWRRTPEG EAASK
|
|---|
| |