Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_3215 |
Symbol | |
ID | 6208815 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 4193181 |
End bp | 4194677 |
Gene Length | 1497 bp |
Protein Length | 498 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641692882 |
Product | hypothetical protein |
Protein accession | YP_001820095 |
Protein GI | 182415029 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.63505 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCCACC TCATCCGCTA TCGCCGGCTA TCGTTGCTCT GCGCCGTCTG CCTGACGCTC TGGCATCCGC TTCGCTCGAG CGCGACCGAG TCGGCGGAAG GCTCCCCGCC CGACGCCGCG CTCGGGCCGC GACAGCGGCT TCTCGTGCTC ACCGACATCG AAGCCGATCC GGATGATTCC CAGTCGCTCG TCCGTCTGCT GCTCTACTCG AACCAGATCG ACTTCGAAGG GCTGGTCGCC ACCACGTCCG TGCACCAGCG GGACGCCGTG CATCCGGAGT CGATCCGCCG CATCCTCGCG GCCTACGGTC GCGTGCGCGA CCAGCTGTTG CGGCACGAAC CCGGCTACCC TGCGGTGGAG CACCTGCAAT CGCTCGTGTC CACCGGTCAG CCGCAGGCCG GACTCGGCGC CGTCGGACCG GGGAAGGATT CGCCGGGCTC CAACGCGATC ATCGCTGCGT TGCGCTCACT GGATCCTCGG CCGCTGTGGA TCAGCGTGTG GGGTGGCGTG AACACGCTCG CCCAGGCGCT GCACACGATT CGGGCAACCG CGTCGCCGGA GGAAGCCCGC CGACTCATTG CCAAACTCCG CGTCTACACC ATTTCCGATC AGGACAACGC CGGCCACTGG ATCCGGCGCG AGTTCCCCGA CCTGTTCTAC ATCGTGAGCC CGGGCGGTTA TGGCGCCAGC ATCTGGATCG CGATCACGGC CCCGATCGAA GGGATCGACA ACACCACGAT CAGCAATCCC TGGCTGCGCC AACACATCCA GCAGAGCCAT GGCCCGCTCG GGGCGGCGTA TCCGGATGTC GCGTATGGTA TGGAGGGCGA CACGCCGTCG TTCCTCCCGC TCATCCCCAA CGGACTCAGC GTCCCCGACC ATCCCGAATG GGGCAGCTGG GGCGGCCGCT ACGAGCTCAA GATCCCCGAC CCGGCCACGC TCGATCTCGG CGGTTTCATC GGCATTCCCT ACGAGCCGGA GACCCGGCCA ATCTGGACCA ACGCCATTGA CGCCTACACC CCGTCGATGC CGCAGGAGTT CCAGCGCGCA ACGGTGCCGT CGATGCGCAC CTTCCGGGAC GCCCGCGTCA CGCTTTGGCG CTGGCGCGAC GAGTTCCAGC GCGACTTCGC CGCCCGCATG GATTGGACGA CCAAGCCCTA CGCGGAGGCG AATCACCCGC CCGTGCCGCG CCTGGCTCAT CCGGATCACT TCACGGTGCA CTCCGGCGAC ATCTTCAACC TCAGCGCCCT CGGCACCACC GATCCCGACG GCGACAGTCT CAGCTATCTC TGGTTTCACT ATCCGGAGGT CGGCGGCTGG ACCGAGGAGA TCAAACCCGA TGTCCGCGCC CCCAATATCT ATTGGGTGCC TTTCAAGGCG CCCACAGTCA CCGAGCCCCG CGACGCTCAT TTCATCCTCA AGGTCACCGA CAAGGGCTCG CCACCTCTCA CCCGCTATCG TCGCGTCATC GTAACCATTC TGCCCGTCTC ACCATGA
|
Protein sequence | MAHLIRYRRL SLLCAVCLTL WHPLRSSATE SAEGSPPDAA LGPRQRLLVL TDIEADPDDS QSLVRLLLYS NQIDFEGLVA TTSVHQRDAV HPESIRRILA AYGRVRDQLL RHEPGYPAVE HLQSLVSTGQ PQAGLGAVGP GKDSPGSNAI IAALRSLDPR PLWISVWGGV NTLAQALHTI RATASPEEAR RLIAKLRVYT ISDQDNAGHW IRREFPDLFY IVSPGGYGAS IWIAITAPIE GIDNTTISNP WLRQHIQQSH GPLGAAYPDV AYGMEGDTPS FLPLIPNGLS VPDHPEWGSW GGRYELKIPD PATLDLGGFI GIPYEPETRP IWTNAIDAYT PSMPQEFQRA TVPSMRTFRD ARVTLWRWRD EFQRDFAARM DWTTKPYAEA NHPPVPRLAH PDHFTVHSGD IFNLSALGTT DPDGDSLSYL WFHYPEVGGW TEEIKPDVRA PNIYWVPFKA PTVTEPRDAH FILKVTDKGS PPLTRYRRVI VTILPVSP
|
| |