Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_3207 |
Symbol | |
ID | 6204249 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 4176215 |
End bp | 4177228 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641692874 |
Product | glycoside hydrolase family protein |
Protein accession | YP_001820087 |
Protein GI | 182415021 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3507] Beta-xylosidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.392595 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.417099 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCGAG TTGTGATCGG TTTCGCTCTC CTGCTGGTCG GGCTCGCCAC CGTCGGCGGC GCCGCGACCA CGCACCGGTC GGAGATCCGG ATCCGCGATC CGTTCGTGCT GCCGGATACG GCGACGCAGA CCTACTACGT CTACGGCACG ACCACCGCCG GGATCTTCGA CGGCGGAATC GAGCGCAAGG CCGTGATGGT TTTCCGGACG AAGGACCTCG ATCACTGGGA GGATCCAACG CCGGTGTGGG AAGTTCCGGC CGACCATTGG GGCCGCGAGA CCGTGTGGGC ACCCGAGGTG CACCGCTATC GGGGTCGCTA CTACCTGTTC GTGACGATCA CGTCGAAGGA GACTCTGCCG ACACCTGAGG GTCGACCGCA GAATGTCCGT CGCGGCACCG AAATCCTCGT TGCCGATTCC CCGCTCGGTC CGTTTCAGCC GCTCGGTCGC GGCCCCCAAA CGCCGCCGAA CTGGATGGCG CTCGACGGCA GCCTGTGGAT TGAGGACGAC GTGCCCTACA TGGTGTTCTG CCACGAGTGG GCGCAGATCA TGGACGGCAG CTTCGACGTG GTCCGTTTGG CCGACGATCT CTCGAAAGCG ATCGGCGAGC CGCGACTGCT CTTTCATGCG TCCGCCGCGC CCTGGGTCCG CTGCCGCGGC GACATCGGCG AACTCTACCA GGGGAAGCGC TATCACGCCT ACGTCAGCGA CGGCAACTGG CTGCACCGCA CCAAAACCGG GACGCTGCTG ATGCTCTGGT CCAGTTACGG CCCACGCAAA TATGCAGTCG GCATCGCGCG CTCCACCAGC GGCAGCGTCT TCGGCCCGTG GGAGCAACTG CCTGAGCCGC TCTGGTCCGA TGACGGCGGA CATCCCATGC TCTTCACAAC CTTCGACGGC CGGCTCGTGA TGGTGATCCA CCAGCCGAAC CGCCAAGTCG AGCGTGCGCG GTTCTTCGAA GTTGAAGACC TCGGCGACAC GCTCCGGATC AAAGGTGAGA TCGGCGGGAC CTGA
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Protein sequence | MTRVVIGFAL LLVGLATVGG AATTHRSEIR IRDPFVLPDT ATQTYYVYGT TTAGIFDGGI ERKAVMVFRT KDLDHWEDPT PVWEVPADHW GRETVWAPEV HRYRGRYYLF VTITSKETLP TPEGRPQNVR RGTEILVADS PLGPFQPLGR GPQTPPNWMA LDGSLWIEDD VPYMVFCHEW AQIMDGSFDV VRLADDLSKA IGEPRLLFHA SAAPWVRCRG DIGELYQGKR YHAYVSDGNW LHRTKTGTLL MLWSSYGPRK YAVGIARSTS GSVFGPWEQL PEPLWSDDGG HPMLFTTFDG RLVMVIHQPN RQVERARFFE VEDLGDTLRI KGEIGGT
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