Gene Oter_3207 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_3207 
Symbol 
ID6204249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp4176215 
End bp4177228 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content65% 
IMG OID641692874 
Productglycoside hydrolase family protein 
Protein accessionYP_001820087 
Protein GI182415021 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3507] Beta-xylosidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.392595 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.417099 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGAG TTGTGATCGG TTTCGCTCTC CTGCTGGTCG GGCTCGCCAC CGTCGGCGGC 
GCCGCGACCA CGCACCGGTC GGAGATCCGG ATCCGCGATC CGTTCGTGCT GCCGGATACG
GCGACGCAGA CCTACTACGT CTACGGCACG ACCACCGCCG GGATCTTCGA CGGCGGAATC
GAGCGCAAGG CCGTGATGGT TTTCCGGACG AAGGACCTCG ATCACTGGGA GGATCCAACG
CCGGTGTGGG AAGTTCCGGC CGACCATTGG GGCCGCGAGA CCGTGTGGGC ACCCGAGGTG
CACCGCTATC GGGGTCGCTA CTACCTGTTC GTGACGATCA CGTCGAAGGA GACTCTGCCG
ACACCTGAGG GTCGACCGCA GAATGTCCGT CGCGGCACCG AAATCCTCGT TGCCGATTCC
CCGCTCGGTC CGTTTCAGCC GCTCGGTCGC GGCCCCCAAA CGCCGCCGAA CTGGATGGCG
CTCGACGGCA GCCTGTGGAT TGAGGACGAC GTGCCCTACA TGGTGTTCTG CCACGAGTGG
GCGCAGATCA TGGACGGCAG CTTCGACGTG GTCCGTTTGG CCGACGATCT CTCGAAAGCG
ATCGGCGAGC CGCGACTGCT CTTTCATGCG TCCGCCGCGC CCTGGGTCCG CTGCCGCGGC
GACATCGGCG AACTCTACCA GGGGAAGCGC TATCACGCCT ACGTCAGCGA CGGCAACTGG
CTGCACCGCA CCAAAACCGG GACGCTGCTG ATGCTCTGGT CCAGTTACGG CCCACGCAAA
TATGCAGTCG GCATCGCGCG CTCCACCAGC GGCAGCGTCT TCGGCCCGTG GGAGCAACTG
CCTGAGCCGC TCTGGTCCGA TGACGGCGGA CATCCCATGC TCTTCACAAC CTTCGACGGC
CGGCTCGTGA TGGTGATCCA CCAGCCGAAC CGCCAAGTCG AGCGTGCGCG GTTCTTCGAA
GTTGAAGACC TCGGCGACAC GCTCCGGATC AAAGGTGAGA TCGGCGGGAC CTGA
 
Protein sequence
MTRVVIGFAL LLVGLATVGG AATTHRSEIR IRDPFVLPDT ATQTYYVYGT TTAGIFDGGI 
ERKAVMVFRT KDLDHWEDPT PVWEVPADHW GRETVWAPEV HRYRGRYYLF VTITSKETLP
TPEGRPQNVR RGTEILVADS PLGPFQPLGR GPQTPPNWMA LDGSLWIEDD VPYMVFCHEW
AQIMDGSFDV VRLADDLSKA IGEPRLLFHA SAAPWVRCRG DIGELYQGKR YHAYVSDGNW
LHRTKTGTLL MLWSSYGPRK YAVGIARSTS GSVFGPWEQL PEPLWSDDGG HPMLFTTFDG
RLVMVIHQPN RQVERARFFE VEDLGDTLRI KGEIGGT