| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3192 |
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| Symbol | |
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| ID | 6206388 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 4149451 |
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| End bp | 4150554 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641692859 |
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| Product | twitching motility protein |
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| Protein accession | YP_001820072 |
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| Protein GI | 182415006 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0324177 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACCC TCACACCCCA CACCGAAATC ATCAACGATC TGCTCAAGCT CGCGGTGGAC
AGCGGCGTGA GCGACGTGAT CATCAAAGCC AACAAACCGG GCTACGTGCG GCTGGCCGGC
CGGCTCAAAC CGGTGGAGAT GGACCCGATC ACCAGTCCCG AGGCGCAGGC GTTCGTGGAC
GAACATGTGC CGGAGGTCTT CCGGCAGAAA TGGGAGGCAT CGGGACAGAT CGACTTTGCT
TATGCGGTCG AATCGATCGG CCGGTTCCGC GTGAATGCGT TTCACCAGCG CGGGCTCGTC
AGCATCGTCA TGCGTCACAT CAAGAGCACC GTGCCGACGT TCGCGCAGCT CGGGCTCGAC
TTTGCCTCCG AGGCGCTGGT CCGGTTGGTG CAGGCGAAGG ACGGCATCCT GCTCGTGTGC
GGCGCCACCG GTTCCGGCAA GAGCTCGACC ATGGCGGCCA TGCTGAACTG GGTGAATCAG
AACATGGACA AGCACATCGT CACGATCGAG GACCCGATCG AATACACCTT CCAGGACGAG
AAATCGCTTT TCCAACAGCG CGAGATCGGG CTCGACGTCT CGAGTTTCGA CGAGGCCATC
AAAGCCGTCC TGCGGCAAAA CCCCGACGTC ATTCTCATCG GCGAAATGCG TGACCGCGAG
ACGTTCGAGA CCGCGATCTC GGCGGCGGAG ACGGGCCACT TGGTTTTCTC CACGATGCAC
GCGGCAACGG TGGCGCAGTC GCTGACACGC CTGTTCGAAT TCTTCCCGCC GGAAGAGCAG
ATCCAGGCGC GGCGGGCGAT TGCCGGGTCG CTGCGCGGTT TCATCTGTCA GAAGCTCATT
CCCGCGCTCG AAGGCGGTGG CCGGGTCGTC ACCAACGAAA TCCTGACCGC CGACGCCGTG
GTGAAAAATC TGATCCTCGA GGGGCAGTTC GAAAAAATCC AAGGCATCCT CGAAGGCAGC
GGCGACTCGA ACAGCTACTC GTTCAACAAA GATCTCTACC GGCTGATCAA GGCCGGGAAG
ATCAGCAAAG CCGATGGACT CAGGTTCTCG CCGAACCCGC AGGCGCTCGA CATGAACCTG
AAGGGCATCT TCATGAAGAC GTGA
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| Protein sequence | MSTLTPHTEI INDLLKLAVD SGVSDVIIKA NKPGYVRLAG RLKPVEMDPI TSPEAQAFVD
EHVPEVFRQK WEASGQIDFA YAVESIGRFR VNAFHQRGLV SIVMRHIKST VPTFAQLGLD
FASEALVRLV QAKDGILLVC GATGSGKSST MAAMLNWVNQ NMDKHIVTIE DPIEYTFQDE
KSLFQQREIG LDVSSFDEAI KAVLRQNPDV ILIGEMRDRE TFETAISAAE TGHLVFSTMH
AATVAQSLTR LFEFFPPEEQ IQARRAIAGS LRGFICQKLI PALEGGGRVV TNEILTADAV
VKNLILEGQF EKIQGILEGS GDSNSYSFNK DLYRLIKAGK ISKADGLRFS PNPQALDMNL
KGIFMKT
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