| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3191 |
|---|
| Symbol | |
|---|
| ID | 6206512 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 4148487 |
|---|
| End bp | 4149380 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641692858 |
|---|
| Product | dihydrodipicolinate synthase |
|---|
| Protein accession | YP_001820071 |
|---|
| Protein GI | 182415005 |
|---|
| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
|---|
| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0102406 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAGC GTCCGCTCAC TGGCACGATC ACCGCGCTTG TCACGCCCTT CCGCAAGGGG
GCCGTCGCAT TTGACGACCT GGAGAAACTG GTCGCGTTTC AAATCAAAGG CGGAATCGAC
GGCCTGGTGC CGGTCGGCAC GACCGGCGAA TCGCCGACGT TGAGCCACGA GGAGCACATG
GACGTGGTGC GGGCGGTGAT CGCCGCGGCG CGGAAGCGCG TGCCGGTGCT CGCCGGCACC
GGCTCGAACT CGACGCACGA AGCCGTCGAA CTCACCAAGC TGGCGCATGA CGCGGGAGCC
GATGCGATGC TCGTGGTTGC GCCCTACTAC AACAAGCCGA GCCAGGAGGG GCTTTTCCAA
CATTACTGTG CGATCGCGGA TGTCACCGAC CGGCCGATCG TGCTCTACTC CATTCCCGGA
CGCTGCGGCA TAGAGATCGG TGTGCCGGTC GTGGAGCGAC TCGTGCGTCG CTACCGACAC
GTGCGCTGGA TCAAGGAGGC CGGCGGCAGC GTTGATCGCG TCGATCAGCT GAAGCAGGCG
CTGGGTTCGG ACATCACGGT GTTGAGCGGC GACGATTCGC TGACCCTCCC CTTCCTGGCC
GTCGGCGCGG AAGGCGTGAT CAGCGTCGCC TCGAACCTGT TCGTGCGCGA GGTGAGCCGA
ATGGTGCAGT TCGCGCGAGC CGACGAGTTT GCGAAGGCCG CGAAGGTGCA CCGGCAGCTG
TATCCATTGT TCAAGGCGCT GTTCATCGAG CCGAACCCCG CGCCGATCAA GGTCGCGCTC
GCCCGCGCCG GCGTGATCGG ATCTGACGAG GTGCGGCCGC CGCTCGCGCT GATGAGCGCC
GCCAATCTTG CCGTGCTGAC CAAGGCGCTC GCCGGTCTCG GACTGCGTCG TTGA
|
|---|
| Protein sequence | MKQRPLTGTI TALVTPFRKG AVAFDDLEKL VAFQIKGGID GLVPVGTTGE SPTLSHEEHM
DVVRAVIAAA RKRVPVLAGT GSNSTHEAVE LTKLAHDAGA DAMLVVAPYY NKPSQEGLFQ
HYCAIADVTD RPIVLYSIPG RCGIEIGVPV VERLVRRYRH VRWIKEAGGS VDRVDQLKQA
LGSDITVLSG DDSLTLPFLA VGAEGVISVA SNLFVREVSR MVQFARADEF AKAAKVHRQL
YPLFKALFIE PNPAPIKVAL ARAGVIGSDE VRPPLALMSA ANLAVLTKAL AGLGLRR
|
|---|
| |