| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3187 |
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| Symbol | |
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| ID | 6204327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 4145657 |
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| End bp | 4146259 |
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| Gene Length | 603 bp |
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| Protein Length | 200 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641692854 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001820067 |
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| Protein GI | 182415001 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0312752 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTTCCA AAGCGCAGGA AGTTGCCCTC GATCGCATCC TCGTGGACCG CTTCAAGAGC
GGTGATCATG CTGCGTTCGA TGAGATGGTG TCGCGCTATT GGGACCGGAT CTACGCGATG
GTGAACCAGC TGCTCCGCAA CTCCCAGGAC GCGGAGGAAG TCACCCAGGA TGCTTTCATC
CGCGCCCACC GCGGCCTCAC CAACTTCCGC GGGGAGTCCG CGTTCTCCAC GTGGCTGTAC
CAAATCGCCA CCAATCTCGC CCGCAACCGC TACTGGTATT GGTGGCGGCG GAAGCGCGAC
CAGTCGGTTT CGATCGATGC CCCCGTGAGC TCCGACAACG CCACCACGCT CGCCGAGATC
ATTCCAGCCG AAGTCGAGAC CCCCGACGAC ATCGCGGTTA CGCAGGAATT CGTGAGCCGC
ATCGGGCGCG GCATGGAAAA GCTCAGCGCC AAACACCGGG AGATTCTCAT TCTGCGGAAT
GTGAAGAATC TCTCGTATGA GGAGATTGCC GACATCCTCA ACATCTCCGT CGGCACGGTT
AAAAGTCGGA TCGCCCGAGC TCGCGAGAGC CTGCGCAGTC GACTGGGGGA GGACTTCAAA
TGA
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| Protein sequence | MSSKAQEVAL DRILVDRFKS GDHAAFDEMV SRYWDRIYAM VNQLLRNSQD AEEVTQDAFI
RAHRGLTNFR GESAFSTWLY QIATNLARNR YWYWWRRKRD QSVSIDAPVS SDNATTLAEI
IPAEVETPDD IAVTQEFVSR IGRGMEKLSA KHREILILRN VKNLSYEEIA DILNISVGTV
KSRIARARES LRSRLGEDFK
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