| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3185 |
|---|
| Symbol | |
|---|
| ID | 6207849 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 4144071 |
|---|
| End bp | 4144664 |
|---|
| Gene Length | 594 bp |
|---|
| Protein Length | 197 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641692851 |
|---|
| Product | OmpA/MotB domain-containing protein |
|---|
| Protein accession | YP_001820065 |
|---|
| Protein GI | 182414999 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0671255 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATATCT CTCTCAAGAA ACTTTGCGTC CTGGCAGTTG GCGCCGCGGT CCTCTTCGCG
GGCTGCTCGA AAAAGCCGAA GCGCCCCGAT CCCAGCGCCA CCGTGCTCGG CCCCACGGCT
GGCGGCACGG TCAATCCCTT GGATGTGAAC GCCCCGGTGG ATGCGTCCGC GGCGGGTTTG
GAACAGCGTG ATCCGAACAT CATCGAGGAC GCGAACAGCA TTCGCGGGAT GTTCGAGCCG
GTTTACTTCG ATTTCGACAA GTCGGACATC AAGCAGGCCG AGCGTGCTAA GCTGCAAAAG
GCCGCGGATT ATATGAAGCA GCACCCCGAG CAGCGGATCC TGCTCGAAGG TCACTGCGAC
TGGCGCGGCA CGGCCGAATA CAACCTCGGC CTCGGCGACC GTCGCGCGAA TGCGGCCAAG
CGCTATCTCA GTTCGCTGGC GCCCGCAGAG CGGATCGAAA CGCTTTCGAA GGGCAGCCTG
GACGCCGCCC AGAATGGCGA CGACGCCGCG ATGGCCAAGG ACCGCCGCGT CGACATCGTC
ATCCTGAAAG CCCCCGGCGC CGCGGGTGCG GCGCTTGCGC AGCCTGGGAT GTAA
|
|---|
| Protein sequence | MNISLKKLCV LAVGAAVLFA GCSKKPKRPD PSATVLGPTA GGTVNPLDVN APVDASAAGL
EQRDPNIIED ANSIRGMFEP VYFDFDKSDI KQAERAKLQK AADYMKQHPE QRILLEGHCD
WRGTAEYNLG LGDRRANAAK RYLSSLAPAE RIETLSKGSL DAAQNGDDAA MAKDRRVDIV
ILKAPGAAGA ALAQPGM
|
|---|
| |