| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3168 |
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| Symbol | |
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| ID | 6205915 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 4123440 |
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| End bp | 4126439 |
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| Gene Length | 3000 bp |
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| Protein Length | 999 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641692834 |
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| Product | excinuclease ABC, A subunit |
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| Protein accession | YP_001820048 |
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| Protein GI | 182414982 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.249908 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.823246 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTGATCA CCGGTCCCAG CGGCTCGGGC AAGTCGTCGC TGGCCTTCGA CACGCTCTAC
GCGGAGGGCT ACCGGAAGTA CATGGAGAGC CTGTCGACGC AGGCGCGACA GGTGCTGGAG
CAGCTGCGCC GGCCGGACGT GGACTTCATC CACGGGCTTT CGCCGGTGCT GGCCATTGAG
CAGCGGACCG GATCGGGCGG GCCGCGCAGC ACCATCGCCA CGGCGACCGA GCTGGCGGAT
TATGCCCAAC TGCTGTGGGC GCTGTGCGGC GAACAGCGGT GCCCGAAAGA CGGTGGCCGC
GTCGTGCAGC GCTCGCTCGA CGGCAATGTG CAGCGCGTGT TGACGGAATG CGCCGGCGAG
CGGATCATGC TGCTCGCGCC CGCGATGCAG GCGAAGGCCA GCGTGTTGCG CGAGGAATTG
CCGCGGCTGC GGCAGCGGGG GTTTCAGCGC GTGCGACTCG ACGGCGAGGT GCGCAATCTG
GATGAACCGA AGCTGATTCC CGCGAACGCC GGCGCGAAGT TGATCACGGT CGACCTCGTG
ATCGACCGGC TGGTCGCGAA TGCCGACCAG CGGAGCCGGC TGGCGGATTC GCTCGAGCTG
GCGTTTCGCG AGGGCAAGGA CCGTGCGATC GTGCTCGCCC AGAAACAAGC GGCCGGCCGC
GTGGCCAGTG TAGCCGGGGT CGTTGACCCC GGCCCGGGCT CGGCGAGCCC GGCTACAACA
TCGGCGTCGG CGCCGGCGGA GTGGCGGGAG ATTCCCCTCA GCCAGTCGCT CGCCTGCGAG
GTCTGTGGCG ACGTGTTCGA GCGGCTGACG CCGAAGCACT TTTCGTTCAA CCACAGCGAA
GGCGCCTGCC CGACGTGCGG CGGCCTCGGC CGAAAGATGC GTTTCGTCCC CGAACTGATC
GTGCCCGATC CGGAGAAGAG CGTCCGCGAA GGTGCGATCA AACCGTGGCG GATCGGGGGA
AAAAATCTCA TCATCAAACA CAACGCGTTG CTGAAGCAGC TCGCCGAGCA ACTGCCGTTC
GACCCGGACG TGCCGTGGCG CTCACTGTCG GAAGAGACGC GGCGCGCAGT CCTGCACGGG
GCGGGCGAGC GGCAGTTCGC CTTCAAGCTG CGCCGGATGC GGGAACCGAA GACCATGCCG
TTCGCCGGCG TGATCGCGGA CCTGGAGGAA AGCTGGCGGC ACACCGACAG CGAAGGGTTC
CGGGCACGGC TGACGACGTT TATGGTGGCG GGTGAGTGTC CCGAATGCCA CGGCACGCGG
CTGAACGCGC GCAGCGGAGC CGTGCGGCTG AACCTCGGGA GTGAACCTGC TCCGAGTGGC
ACGGGCGTCC CGCCCGTGGA CTCTGGATCT GCATCTGACG ATCACGGACG AGACGCCCGT
GCCACGACCT CCCCACTCTC GTTTCCCGAA TTCAACGCGC TCGATATCGA GGCGGCGCAC
GAGTTCGCGC GCCGCCTCGA TATCGAGGCG GCGCACGAGT TCGCGCGCCG CGCGGTCGCG
ACGTACGGCG ACAACGACGC GGTGCGCGAG GTGGTCACGG GCATCGAGCA GCGGCTGCAT
TTTCTGGCTG AGACCGGGCT GGGTTATCTG ACGCTCGACC GCGACTACGC CACGCTCTCG
GGCGGCGAAG CACAGCGCGT GCGGCTCGCG ACCCAGCTCG GCATGGGGCT GATGGGCGTG
ATCTACGTCC TGGACGAGCC GAGCATCGGG CTGCATCCAC ACGACAACCA GAAGCTCCTC
GATACGCTCG TGGCGCTGCG CGACCGCGGC AACACGGTGA TCGTGGTCGA GCACGATGAG
GAGACGATGC GGCTCGCGGA CGAGTTGATC GAGCTCGGCC CTGAGGCCGG CGTGGAGGGC
GGCCGGGTGC TGTTCCAAGG CTCGCCGGCC GACTGCATGA AACTCTCCGC GAAGGTCTCG
CGCACCGGCC CGTATCTCGC CCGCACGATG GGCGTGACGA AGGATGCCGC CACCAAGCAG
CCGGACGGTG CATGGCTGAC GGTGCGGGAG GCGCGCGAGA ACAACCTGCG CGGCATCGAC
GCGCGTTTCC CGGTCGGGTT GCTGACCTGC GTGACCGGCG TAAGCGGCTC GGGCAAGAGC
ACGCTCGTGA ACGATATTCT CGCCGCCGCG GCGGCGAGAA AGCTGAACGG CGCGAAGACA
CTTCCCGGCA AGCATCGTGC GATCGAGAAT CTCGATTTCT TCGAAAAGCT CGTGCGGGTC
GACCAGGAGC CGATCGGACG CAGCCCGCGT TCGAACCCGG CGACGTATGT CGACCTGCTC
GGACTGTTGC GGGACCTGTT CGCGCAGATG CCGCTGGCGA AGATTCGCGG CTACAAGGCG
AGCCGGTTCT CGTTCAATGT GCGTGGCGGC CGCTGTGAGC GCTGTCAGGG CGATGGCGTG
ATCAAGCTCG ACATGCAGTT CCTTGCCGAC GCCTACGCTC CGTGTCCGAG CTGCGGCGGC
CGGCGGTTCA ACCGCGAGAC GCTCGAGGTG CTGTTTCACG GCAAGTCGAT CGCCGACGTG
CTCGACCTCA CCGTGCGCGA GGCGATGTCG CTCTTCCGCA ACATCCCGCG GGTGATGGAC
AAGCTCACGA CGCTCGATGC CGTCGGTCTT GGCTATCTGA CGCTCGGCCA GTCGGCGACG
ACGCTGTCGG GTGGCGAGGC GCAGCGCATC AAGCTCTCGC TCGAGCTGAG CAAACGGCAG
CAAGGCCATA CGCTCTACAT CCTCGATGAG CCGACGACCG GACTGCACTG GGTCGACATT
CAGAAGCTGA TGGACCTGCT GTTTAAACTC CGCGACGCCG GCAACACGGT GATCGTGATC
GAACACAACC TCGACGTGAT CAACCTTGCG GACTGGATCA TCGATCTCGG GCCGGGCGGC
GGCCGCGCGG GCGGGGACGT CGTGTTTGCC GGACCGCGGA CGGAGATCGA GCTCAAGGCA
CCATCGCTCA CCGGCGCCGC GCTGCGCCGG TGGCGTGCGG CGGGAAAGAC GGGCGGGTAG
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| Protein sequence | MVITGPSGSG KSSLAFDTLY AEGYRKYMES LSTQARQVLE QLRRPDVDFI HGLSPVLAIE
QRTGSGGPRS TIATATELAD YAQLLWALCG EQRCPKDGGR VVQRSLDGNV QRVLTECAGE
RIMLLAPAMQ AKASVLREEL PRLRQRGFQR VRLDGEVRNL DEPKLIPANA GAKLITVDLV
IDRLVANADQ RSRLADSLEL AFREGKDRAI VLAQKQAAGR VASVAGVVDP GPGSASPATT
SASAPAEWRE IPLSQSLACE VCGDVFERLT PKHFSFNHSE GACPTCGGLG RKMRFVPELI
VPDPEKSVRE GAIKPWRIGG KNLIIKHNAL LKQLAEQLPF DPDVPWRSLS EETRRAVLHG
AGERQFAFKL RRMREPKTMP FAGVIADLEE SWRHTDSEGF RARLTTFMVA GECPECHGTR
LNARSGAVRL NLGSEPAPSG TGVPPVDSGS ASDDHGRDAR ATTSPLSFPE FNALDIEAAH
EFARRLDIEA AHEFARRAVA TYGDNDAVRE VVTGIEQRLH FLAETGLGYL TLDRDYATLS
GGEAQRVRLA TQLGMGLMGV IYVLDEPSIG LHPHDNQKLL DTLVALRDRG NTVIVVEHDE
ETMRLADELI ELGPEAGVEG GRVLFQGSPA DCMKLSAKVS RTGPYLARTM GVTKDAATKQ
PDGAWLTVRE ARENNLRGID ARFPVGLLTC VTGVSGSGKS TLVNDILAAA AARKLNGAKT
LPGKHRAIEN LDFFEKLVRV DQEPIGRSPR SNPATYVDLL GLLRDLFAQM PLAKIRGYKA
SRFSFNVRGG RCERCQGDGV IKLDMQFLAD AYAPCPSCGG RRFNRETLEV LFHGKSIADV
LDLTVREAMS LFRNIPRVMD KLTTLDAVGL GYLTLGQSAT TLSGGEAQRI KLSLELSKRQ
QGHTLYILDE PTTGLHWVDI QKLMDLLFKL RDAGNTVIVI EHNLDVINLA DWIIDLGPGG
GRAGGDVVFA GPRTEIELKA PSLTGAALRR WRAAGKTGG
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