| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3167 |
|---|
| Symbol | |
|---|
| ID | 6204546 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 4121120 |
|---|
| End bp | 4123105 |
|---|
| Gene Length | 1986 bp |
|---|
| Protein Length | 661 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641692833 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001820047 |
|---|
| Protein GI | 182414981 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.719833 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.715398 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGACC GACCAGACCG TGTAGTTCCT CGTTTGGCGC ATCTGATTGC GCTGGCGATC
GCCGCCGCGA CACTTCTCTC GCCGAGCGTG TCCGCGCTCC AGTTCACCTC CGGCAAACTG
ACCGGTAGCT TCGATTCCAC CTTCTCGGTG GGCGGACTCT ATCGGTTGAA CGACCCTGAT
CCCATGTTCT ACGGGATCAC CAACAGCTTC AATGGCGTCC GCGGCCAGCA GAACTCGGTC
AACGCCGACG ACGGCAATTT GAATTACGGC CAAGGCTGGG CCTCGTTCCT CGCCAAAGGC
TCGCATGATC TCGAACTGCG CTACGAAAAC TTCGGCGCGT TCATCCGCGG TTACTATTTC
ACCGACGGCA AGACCGACAA GACGCTGCGC ACGCCGTTGT CCGGGGACGC GCGTGAACGC
GTCGAACAGG GCGCCGAGCT GCTCGACGCC TACGTCGTGG CGAAGTTCAC CTTGTTCACC
GACACGCCGG TGGACGTGCG TCTGGGCCGC CAGGTGCTGA GCCTCGGTGA GAGCACGTTC
ATTCCGAACG GCATCAACGT CGTAAATCCG GTCGACCTCT CGAAGCTGCG CGCGCCGGGC
TCGGAGCTGA AGGAAGCCTT CCTGCCGGTG AACATGCTCA AGGCCTCGAT CGGCGTCACC
GAAAACCTCA CGATCGAGCC GTTCTGGCTG CTGGAGTTCC GGCGCAATGA GCTCGAGCCG
GCGGGCACGC TTTTTTCCAC GAACGACATC GCCGGCCGCG GCGGCAACAA GGTGCTGCTC
GGCTTCGGCG GATTGCCGGA CTCCGGCACG ACGGGCGCGA TTCCCCGTAC GGATGACCGC
CGCCCGCAGG ACATTCACCA GTACGGCGTC GCGGTGCGCA CCATGGTGCC GGCGCTCAAC
GACACCGAGT TCGGCTTCTA CTTCGCCAAT TACCGCAGCC GTTCGCCGGT GATCAGCGCG
CGCACGCCGA CGCGGGGCAT CAGCTCGGCC TTTGTGGTGT CGACGGCCAG CGGCCTCGCG
CAGCAGCAGC TCGCGCCCGC GATGGTGGCG GCCGGTTACC CGGCGGCCGG TGTGCCGTCC
GCGCTCACCA CGCTGATCGG CGCCGCGCTG ACCAACGTGC CCGGGGCCGC GCTCCCCGCG
ACCCTGCGGC CCTTCTACCC CGCCGCCCAG ACGATCGCCG CCGGCGCCGG CAAGCTCGGG
CTGCTCGATG CCGCCGCCAC CGCGCGCTAC TTCATCGAAT ATCCCGACGA GATCTCGATG
CTCGGCGCGA GCTTCAACAC CAGCGTCGGC AACACCGGCA TCTCGTGGCA GGGCGAGGTC
TCGTTCAAGA ACGACGTGCC GCTGCAGGTC GACGACGTCG AACTGCTCTT CGCCGCGTTG
TCCGTGCTGA ATCCGTTGTT CGCTCCGCCG AACAACCAGA TGGGTAACTT CCTCGGCCAA
TACAACCGCG AGATCCCCGG CTATCGCCGG CACAAGGTCT GGACCGCGCA AACGACCGTC
ACGAAGGTCT TCGGCCCCAT GCTCGGCGCG CAACAGCTCA GCCTCGTCGC CGAGGTCGGC
GGCGTGCAGG TCAATCTGCC CAGCAAGACG ACGCTGCGCT ACGACGGCCC GGGCACGTTC
ACCTCGGGCG ACTGGCTCGC GATGGCCCGC ACCGGCAACA CGCAATACGG CTATACGCCG
GGCAAGGCCT TCGCGGATAA ATTCTCGTGG GGTTACCAGG TGTTCGCGCG GCTCGACTAC
ACGAACCTGT TCGCCGGCGT GAACATGTCG CCCGCGATCG GCTTCACGCA CGACGTCCGC
GGCAACACGC CCCTGCCGCT CGGCAACTTC ATCGAGGACC GCAAGAGCGT GAACCTCTCC
GCGGAGTTCA CCTACCAGAA CCGCTGGGCC TTTGAGCTGC GCTACGTGAA TTACTTCGAC
GGCGGCCGCT ATAATCTCCT GCAGGACCGC GATTTTGTCG CGACCACGCT GAAATACTCC
TTCTGA
|
|---|
| Protein sequence | MNDRPDRVVP RLAHLIALAI AAATLLSPSV SALQFTSGKL TGSFDSTFSV GGLYRLNDPD
PMFYGITNSF NGVRGQQNSV NADDGNLNYG QGWASFLAKG SHDLELRYEN FGAFIRGYYF
TDGKTDKTLR TPLSGDARER VEQGAELLDA YVVAKFTLFT DTPVDVRLGR QVLSLGESTF
IPNGINVVNP VDLSKLRAPG SELKEAFLPV NMLKASIGVT ENLTIEPFWL LEFRRNELEP
AGTLFSTNDI AGRGGNKVLL GFGGLPDSGT TGAIPRTDDR RPQDIHQYGV AVRTMVPALN
DTEFGFYFAN YRSRSPVISA RTPTRGISSA FVVSTASGLA QQQLAPAMVA AGYPAAGVPS
ALTTLIGAAL TNVPGAALPA TLRPFYPAAQ TIAAGAGKLG LLDAAATARY FIEYPDEISM
LGASFNTSVG NTGISWQGEV SFKNDVPLQV DDVELLFAAL SVLNPLFAPP NNQMGNFLGQ
YNREIPGYRR HKVWTAQTTV TKVFGPMLGA QQLSLVAEVG GVQVNLPSKT TLRYDGPGTF
TSGDWLAMAR TGNTQYGYTP GKAFADKFSW GYQVFARLDY TNLFAGVNMS PAIGFTHDVR
GNTPLPLGNF IEDRKSVNLS AEFTYQNRWA FELRYVNYFD GGRYNLLQDR DFVATTLKYS
F
|
|---|
| |