| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3166 |
|---|
| Symbol | |
|---|
| ID | 6207025 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 4119739 |
|---|
| End bp | 4121094 |
|---|
| Gene Length | 1356 bp |
|---|
| Protein Length | 451 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641692832 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001820046 |
|---|
| Protein GI | 182414980 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.585126 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAACT CTGTTCTCTT TTCTGCCTGG CTGCTTGGAA CCGCCGCGCT GGCGTCCGCC
GCCATCACCT CGGAGCAGGC TGCCCGACTC GGCCAGGATC TCACGCCGGT CGGCGCCGAG
CGCGCCGGCA ACGCCGCGGG GACCATCCCT GAGTGGACCG GCGGCATTAC CACGCCGCCC
GCCGGCTATA CGGTCGGCAT GCATCACCCG GATCCGTTCG CGCAGGATCA GCCGTTGTTC
ACCGTCACCG CGGCCAACAT CGCGGAGCAC GAGGGCCAGC TCGCTGCCGG GCACATCGCG
CTGATGCGGG CCTATCCCAC CTACAAGATG GTGGTCTATC CGTCGCACCG CAGCTTTTCG
AATCCGCAGT CCGTCTACGA CGCCACGAAG GAGTTCGCCA CGACCGCCAA GCTGAACGCC
GACGGCAACG CCTTCTCCGG CGCGCTCCGC GGCGTGCCGT TCCCGATCCC GGCCGACGCT
CGCGAGGTGA TCTGGAACCA TCTGACGCAT TATCGCGGGC TGGCCGCGAT GCGGCCGATC
GCACAGGCGG CGCCGCTGCC GAACGGCAGC TACACCCTCG TGCAGTTCGA GGACGAGTTC
CTGTTCAACT ACAACCGGCC CGACCTCACC CTGAAGGAAC TCGAGGAGAG CAACACGCTG
TTCTACTTCA AGCAGACCGT GCTCGCGCCG CCGCGGCTCG CCGGCACGAT CCTGCTGGTG
CACGAGACCC TCGACCAGGT GAAGGAGAAG CGCCGCGCCT GGGTCTACAA CGCCGGCCGC
CGTCGCGTCA CGCGCGCGCC GGACGTCGCC TACGACAACC CCGGCACCGC CGCCGACGGC
CAGCGCACGA GCGATCAGCT CGACATGTAT AACGGCGCGA TGGATCGCTA CGACTGGAAG
CTCGTCGGGA AAAAGGAGAT GTTGATGCCC TACAACTCCT ACAAGCTGCA CAGCGACCAG
GTAAAGTATA AGGACATTCT CACCCCGAAG CACATCAACC AGGACCTCGC CCGCTACGAG
CTGCATCGCG TCTGGGTCGT CGACGCCACG TTGAAACCCG GCACGAATCA CCTCTACGCC
CGCCGCACGT TCTACGTCGA TGAGGACAGC TGGCAGATTC TCGCCGTCGA CCAATACGAC
TCGCGCGGCC AGATGTGGCG CGTATCCGAG GCTCACTGCA TCAACTATTA CGACGTACCC
TGCTTCTGGA GCACGTTGGA GGTGCACACC GACCTGCAGT CCGGCCGCTA TCTCGCGCTC
GGCTTGGACA ACGAAGGCCG GATGTATGAC TACAGTTTGA AACGGACACC TGCGGACTAC
ACCCCGGATT CGCTTCGTCG CGAAGGAATC CGGTAA
|
|---|
| Protein sequence | MKNSVLFSAW LLGTAALASA AITSEQAARL GQDLTPVGAE RAGNAAGTIP EWTGGITTPP
AGYTVGMHHP DPFAQDQPLF TVTAANIAEH EGQLAAGHIA LMRAYPTYKM VVYPSHRSFS
NPQSVYDATK EFATTAKLNA DGNAFSGALR GVPFPIPADA REVIWNHLTH YRGLAAMRPI
AQAAPLPNGS YTLVQFEDEF LFNYNRPDLT LKELEESNTL FYFKQTVLAP PRLAGTILLV
HETLDQVKEK RRAWVYNAGR RRVTRAPDVA YDNPGTAADG QRTSDQLDMY NGAMDRYDWK
LVGKKEMLMP YNSYKLHSDQ VKYKDILTPK HINQDLARYE LHRVWVVDAT LKPGTNHLYA
RRTFYVDEDS WQILAVDQYD SRGQMWRVSE AHCINYYDVP CFWSTLEVHT DLQSGRYLAL
GLDNEGRMYD YSLKRTPADY TPDSLRREGI R
|
|---|
| |