| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3156 |
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| Symbol | |
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| ID | 6205486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 4104468 |
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| End bp | 4107131 |
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| Gene Length | 2664 bp |
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| Protein Length | 887 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641692822 |
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| Product | permease |
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| Protein accession | YP_001820036 |
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| Protein GI | 182414970 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.76534 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAACCT GGTCCAAGCT GAAGACGCTG TTTCGCCGGC GGAAGGCCGA GGCGGAAATG
TCCGCCGAGA TCCGGCTGCA CCTCGAGTTG CAGACGGAGC GGAACATCGC TGCCGGATTG
GATCCCAACG AAGCGCGCTA TGCGGCGCAG CGCGCCTTCG GCGGCGTCGA GCAGGTGAAG
GAACGCTGCC GGGAGCAGCG GTCGCTGGGC TGGCTGGAGT ATCTCGTCCG CGATGTGCGC
CTGGCCGCGC GCTCGCTGCG ACGCGCGCCG CTGTTCAGCG CGGCGGTGAT CGCGACGCTC
GCGCTGTGCA TTGGGCCGAA CACCGCGATC CTGACCCTGC TCTACGCGCT GGTGCTCAAG
CCGGCGCCGT TCCCGCAGCC GGAGCGGCTC GTGCAGGTTT ACAACGCGTT CGAGAAGCTG
GGCGGTGAGC GCAGCCGGCA GGCCAGCAGC GTGCCGCAAT ACCGCGATTT TCAGGCCAAC
GCGGACCTGT TCGAAGGCTT CGCGATCATG CGCTACGCCG GCACGACGCT GGACGACGAG
ACCATGCCTC AGCGGGTGAT GGGCATGCGC GTGAACGCGG GCTTCTTTGA CCTGCTCGGC
GTGCGTCCTC TGCTCGGCCG GTTCGGAATG CCCGAGGAGG ATGCGATCGG CGCCGACCAC
GTGCTGGTGC TGACGCGGAC GTTTTGGGAA TCTCACTTCA ACGCCGATCC GAACGTGATC
GGACGTGTCG TGCGGCTCGG AGGCGAGCCC TGGACGATCA TTGGCGTGGC GCCGCGATCG
GTCGAGGTGC TCGACCGCTA CACGCAATTC TTCAAGCCCT TCGAGCCGCT GCCGAACGAG
GTGGACCCGC GCGCACGCTA CGCCGGACGG GTTCTCGTGT TCGGACGACT AAAGCCGGAC
GTGACGCGCA GCGCGGCGGT GGCGCAGCTT CGAACGATCG ACGGGCGCTA TCTCGACGAG
CAGGCGGCGC CCGCCACGCG CTCGTATTTC GAAACCGCGG GCCACCGCGT CGTGATCGAG
AGTCTCGGTG CGCAAACGGC AGATGCGGTA AGCCGGCCGC TGACACTGCT GCAGGTGGGC
GCGGGGTTCG TGCTGCTGAT CGGGGTGGTG AACGTGCTGA ATCTGATGCT CGCGCGGGTG
AACGCGAAAC GGCCGGAGCT GGCGATCCGG CATGCGCTCG GCGCGGGGCG CGCGACCCTG
CTGCGGCAAT TGCTGGCCGA GAGCCTGCTG CTCACCGCAG CGGCGACCGT GGTGGGAGCA
GGACTCGCGT GGGCGGCGGT TCGGGTGATC AACGGCTACC TGCCGATGTT CGCGGGATCG
GCAGCGCCGG TGCAACTGGA GCCGGCGATG GTCGGACTGG CGGCGGTGGT GGCGTTCGCG
CTGGCCGGCG TGATGGGCGT GTTGCCGTTC GCGCTGCTGT GGAAACGCGG ATTGAAACTG
AACGAAATCC GCACGGCGTC AGCGGGCGCC GGCGTGCGGG TGTTTGGAGG CACGCTCGTC
GTGGCGCAGG TGGCGATCGC CCTGCTGCTG CTCGTGGGGG CCGGTTTGTT GGGACGAAGT
TTGGCGCGGG TGCTGGCGAC GGATCCGGGC TTCGAGACGG CGAATCTTGT GCAGGGCCGG
GTGGCGGTGC CGAAGCCCTA CGAATCGCCG CAGGCGAATG TGGCCTTGCA GCGGCGGATC
GTCGACGGCC TGCGGGAAAT CCCGGGGGTA GAGGGAGCCG CGCTGGTGTT TGACTACGCG
CTGTCAGGGA GCTTCCGGGC GCAGCCGTTT GTCATTCGCG GCGAGGCGGC CAAACCCGGG
GCGAACCGGC CGCTCGTCGC AATCGATCCG GTGTCGCCGG AATTCTTCGA TACGTTACGG
ATCACACTGC TCGAAGGGCG GGGGTTTACC TACGCGGACG ATGTGCGGGG CAGCGCGGTG
CTGGTGGTGG ACGATCTGTT CGCCAAGCGG TATTTCCCGG GCCGCAGCGC GGTGGGGCGG
GAAGTTGCGT TGTCGGTCCA ACCGCCGCCG GACGGCCAGC CGTGGCCGCG GATCATCGGG
GTGGTGCGCC GGCCGCAGCT CACGGGATTG GAAGGCCGCG ACGGCATGCC GATCGTATTC
GTGCCGATGG TGCAGCAGCC AGCCGGCGGG TTTTCGTTTG TCGTGCGTTC CGCGCGGGAC
ACGGGCGATC TCATCGCGGA GATTCGCCGC AAGCTGCGCA GCATCGAACC GACGCTGCCG
CTCTACGGCA CGGCAACGAT CGACGAGGGG TTGGCCAGCA TGATGATGGG GCGTCGCGGG
ATGACGCTGC TGATTGCGGC ATTTTCCGGG CTGGCGTTGA TGCTCGCGGG TGTCGGGCTG
TATGGCGTGC TGGCGTATGA CGTGTCGCAG CGCACGCGCG AGATCGGGAT TCGCGGCGCG
ATTGGCGCGA CGCGCGGGCA GATTGTGGCG ATGGTGCTGC GTCAGGGAAT GGTGAAGACG
GCGCTCGGGG TGGGGGCGGG ACTGGCCGGC GCGGTGTATC TCACCCGGTT CCTTCGCGGC
CTGTTATTCG ACGTAGAGCG GTTCGATCCG GTGGCGTTCG TGGGAGTTTC GTTGCTGATG
CTGGCGGTGG CGGCGCTGGC GTGCTGGCTG CCGGCGCGGC GGGCGGCGAA GGTGGATCCA
ATCGTGGCGC TGCGGTGCGA GTGA
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| Protein sequence | MKTWSKLKTL FRRRKAEAEM SAEIRLHLEL QTERNIAAGL DPNEARYAAQ RAFGGVEQVK
ERCREQRSLG WLEYLVRDVR LAARSLRRAP LFSAAVIATL ALCIGPNTAI LTLLYALVLK
PAPFPQPERL VQVYNAFEKL GGERSRQASS VPQYRDFQAN ADLFEGFAIM RYAGTTLDDE
TMPQRVMGMR VNAGFFDLLG VRPLLGRFGM PEEDAIGADH VLVLTRTFWE SHFNADPNVI
GRVVRLGGEP WTIIGVAPRS VEVLDRYTQF FKPFEPLPNE VDPRARYAGR VLVFGRLKPD
VTRSAAVAQL RTIDGRYLDE QAAPATRSYF ETAGHRVVIE SLGAQTADAV SRPLTLLQVG
AGFVLLIGVV NVLNLMLARV NAKRPELAIR HALGAGRATL LRQLLAESLL LTAAATVVGA
GLAWAAVRVI NGYLPMFAGS AAPVQLEPAM VGLAAVVAFA LAGVMGVLPF ALLWKRGLKL
NEIRTASAGA GVRVFGGTLV VAQVAIALLL LVGAGLLGRS LARVLATDPG FETANLVQGR
VAVPKPYESP QANVALQRRI VDGLREIPGV EGAALVFDYA LSGSFRAQPF VIRGEAAKPG
ANRPLVAIDP VSPEFFDTLR ITLLEGRGFT YADDVRGSAV LVVDDLFAKR YFPGRSAVGR
EVALSVQPPP DGQPWPRIIG VVRRPQLTGL EGRDGMPIVF VPMVQQPAGG FSFVVRSARD
TGDLIAEIRR KLRSIEPTLP LYGTATIDEG LASMMMGRRG MTLLIAAFSG LALMLAGVGL
YGVLAYDVSQ RTREIGIRGA IGATRGQIVA MVLRQGMVKT ALGVGAGLAG AVYLTRFLRG
LLFDVERFDP VAFVGVSLLM LAVAALACWL PARRAAKVDP IVALRCE
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