Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_3147 |
Symbol | |
ID | 6205515 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 4088536 |
End bp | 4091238 |
Gene Length | 2703 bp |
Protein Length | 900 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641692813 |
Product | DEAD/DEAH box helicase domain-containing protein |
Protein accession | YP_001820027 |
Protein GI | 182414961 |
COG category | [R] General function prediction only |
COG ID | [COG1201] Lhr-like helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0156392 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.41345 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGTTCA CCCGCGTCAC TTCACCGGCG TTCACCGAAT CGCGACTCTA TGCCGCGCTC CACCCCGACC TCGCCGCTTG GTTCCGCCGC CGCTTCGCCC ACTTTTCTCC CGCCCAGCTC CACGCCGTGC CTGAGGTCCT CGCCGGGAAC TCGCTCCTGC TCACCTCTCC GACCGGCAGC GGCAAAACCC TCGCCGCGTT TCTGTCCGTG TTCGACTGGC TCGCGCGGGC GCGTGATCGC GGCGAACTGC CGAACGGGAT CGTCGCCGTC TACGTGTCAC CATTGCGCGC CCTGGCCTAT GATCTCCGCA AAAACCTCGC GGAGCCCGTG CGCGAGCTCG GCTGGGACTG GCTGCGCGTC GGCGCCCGCA CCGGAGACAC CTCGCCCGCA GAACGCGCAG CGCAGCGGCG CAAGCCGCCG CACATTTTCG TCACCACGCC CGAGAGTCTC ACGCTGATGC TCAGCCAACC GGGCTGGATC GCCGCGTTCA CCTCCACGCG TTTCCTCATC GCCGACGAGC TTCACGCGCT CGCCGAAAAC AAACGCGGCG CGATGCTCGC CGTCGCCGCC GAGCGGCTGG AGGAATTTCC GATTGCCGAA CGTCGATCGC CGAACGTCCC AGCGCCTCCA CCCCATGTTC CGGGAGATCC GACCGCTAGT TCACAATCGG CCATCGAAAA TCAGAAATCG AAAATCATCA GAATCGGTCT TTCGGCGACG GTCGCCCCGC TCGAAACCGT CGCAGCGTTC CTCGTCGGTC CCGGCCGTCC GTGCCGGATC GCCGAGGTGA CGCAGACCAA GCCGGCGAAG ATCGAGGTTT TCTCGCCGCT GCGCGAGCAC GCCTATCCGC CCGCCGGCTA CACGGCCACC CGTGTGCTCG CCGAACTCAG CGTGCTCCTC GAAAAGCACA AGACCACCCT CGTGTTCACC AACACGCGCA GCGGCGCGGA ATCGATCGGG CTTCGGTTGA AGCAGCTGCG GCCCGAACTC AGTGACTTGA TCGAGGTGCA TCACGCCTCG CTCGATCGTG GCGTGCGGCT GGAGATCGAG GATCGGCTGA AACGCGGCGA GCTGCGCGCG GTGGTGTGCT CGACCTCGCT CGAGATGGGC ATTGATATCG GCTCGATCGA CGTGGTGGTG ATGGTGTCGG CGCCGAAAGG CGTGTCGCGC GCCCTGCAGC GCATCGGGCG CTCGGGCCAC TCGATGGGCC GGATCAGCCA CGGGATTCTC GTCGCCAGCA ATATCAACGA CCTCGCCGAA TGCGCCGTCA CCGCGCGGAT GATGGCGCGG CGCGAGCTCG AGCCGGTGAA GATTCACGAG AACCCGCTCG ACGTGCTGGC GCAGACGCTG GTCGGGCTGG CGATTTTCGG CAGTGAGACG CCGGACGAAG CGTTCGCGCT CGTGCGCCGC AGTTATCCGT TCCGCGACCT GCCCCGCGCC ACGTTCGAAC GGGTGCTCCG CTATCTGCGC GGCGGCGGCG TTTCGCTCGA GCGCAACTAC GAAAACGTCT TCGGCAAGGT GCGCGTTGAT GCCAGCGGCC AGCTCGTCCT CACCTCGCCG CGCGTCGCGC GCAGCTTTTA TCAGAACATC GGCACGATCA ACACCGAGAG CATGGTGCAG ATTCGGCTCG GCCGCCGAAA CCTCGGGCAG GTCGAGGAAT CGTTCATGCG GGGCCTGCGC CCGGGCGACG TCTTCGTGCT TAACGGACGC TGCGTGCGGC TGGTGAAAAC CCATTTGCTC AGTGCGCAAG TCGTGCGCGC CGACCACGCG CTGCCGACGG TTCCGCGCTG GTATGCGAAC AAGATGCCAC TCGCCTCCGG GCTTGCCGCC GAGGTCGTGC GGCTGCGGAC GGAAGTGGCG AAACGGCTTG GTGGGAGCGC GGGCGTCCCG CCCGCCTCCG GCCAACCCGC GGGCGAGACG CCCGCGCTCT CATGGCTTCG CTCCGAATAC GGCCTCTCCG CCGCGAACGC CCGTGCGCTG ATCGATCATT TCTCGTTGCA GGCACAGATC TCCGCGATTC CGACGGCGGG CGTGTTCCTG ATCGAGCGCT ACCGCGAGGG CGACCTGCTC CACTACTTTT TCCACGCGCT CATCGGCCGG TCCGCGAACG ACGCACTGTC GCGCATCGTG GCGCAACGCG TGCAGTCGCT CAAAGGTGGC AACGCGCTCG TGACCATCGA CGATTACGGG TTCCTGCTCA GCCTGCGTTC GTTCCAGGCG ATGGAGGAAC CGGAACTGCG TACACTGCTG GTACGCGACG GCGCCGAGGA CGCGCTGCGG CTCGCGCTCG CCGATGCCTC GCTCGTGAAA TGGCAATTCC GCGGCGTGGC GCAGACCGGA CTCATGGTGC CGCGGCGGGT GCACGGCGTC GAACGCGGCA CGCGCATGCT CCAGTGGAGC GCCGAAATCA TCTTCGAAGT GCTGCGCGAG CATGAGCCGG ATCACCCGCT GCTGCTCGAA GCCTACGCCG AGGCGACATT GCGTTTTCTC GATCTGCCCC GCGCGCTTGG CTTTCTCGAG CAAGTCGACC GCCTGCGCTG GGACATTCGC GATCTACCCC GGGTGAGCCC GTTTTCCTTC GGGATCTACG TCAGCAAGAT CAAAGAAACG ATGACCCTTG AAGATCCCGA GACGACGATT GAGCGTCTCT ACCATGCAAT GTACGGCGCC AACGCACCCA CCGCGGCTTC AAGTCCGACC TGA
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Protein sequence | MLFTRVTSPA FTESRLYAAL HPDLAAWFRR RFAHFSPAQL HAVPEVLAGN SLLLTSPTGS GKTLAAFLSV FDWLARARDR GELPNGIVAV YVSPLRALAY DLRKNLAEPV RELGWDWLRV GARTGDTSPA ERAAQRRKPP HIFVTTPESL TLMLSQPGWI AAFTSTRFLI ADELHALAEN KRGAMLAVAA ERLEEFPIAE RRSPNVPAPP PHVPGDPTAS SQSAIENQKS KIIRIGLSAT VAPLETVAAF LVGPGRPCRI AEVTQTKPAK IEVFSPLREH AYPPAGYTAT RVLAELSVLL EKHKTTLVFT NTRSGAESIG LRLKQLRPEL SDLIEVHHAS LDRGVRLEIE DRLKRGELRA VVCSTSLEMG IDIGSIDVVV MVSAPKGVSR ALQRIGRSGH SMGRISHGIL VASNINDLAE CAVTARMMAR RELEPVKIHE NPLDVLAQTL VGLAIFGSET PDEAFALVRR SYPFRDLPRA TFERVLRYLR GGGVSLERNY ENVFGKVRVD ASGQLVLTSP RVARSFYQNI GTINTESMVQ IRLGRRNLGQ VEESFMRGLR PGDVFVLNGR CVRLVKTHLL SAQVVRADHA LPTVPRWYAN KMPLASGLAA EVVRLRTEVA KRLGGSAGVP PASGQPAGET PALSWLRSEY GLSAANARAL IDHFSLQAQI SAIPTAGVFL IERYREGDLL HYFFHALIGR SANDALSRIV AQRVQSLKGG NALVTIDDYG FLLSLRSFQA MEEPELRTLL VRDGAEDALR LALADASLVK WQFRGVAQTG LMVPRRVHGV ERGTRMLQWS AEIIFEVLRE HEPDHPLLLE AYAEATLRFL DLPRALGFLE QVDRLRWDIR DLPRVSPFSF GIYVSKIKET MTLEDPETTI ERLYHAMYGA NAPTAASSPT
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