| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3134 |
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| Symbol | |
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| ID | 6204991 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 4078971 |
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| End bp | 4079843 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641692800 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001820014 |
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| Protein GI | 182414948 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02957] RNA polymerase sigma-70 factor, TIGR02957 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.804493 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGAGG ACTTCCATTC CAGCCGACCG CGCTTGTTCG GCATCGCGTA TCGGATGTTG
GGCAGTGTGG CGGAGGCCGA GGACATGGTG CAGGAAACTT ATCTGCGCTG GCAGCGGCAG
GAGCGTACCT CGGTCGAGGA ACCGGCCGCG TGGTTGGTCA CGACGGTGTC GCGGCTTTGC
ATCGACGAAC TGCGTTCCGC GCGGCGGCGG CGCGAAGAGT ATGTGGGCAC CTGGCTGCCG
GAGCCACTGC TCGACACGTC GCTGCTCGCA CCCGATCAGG CGGCGGCGCG GACGGATTCG
CTCAACCTGG CATTCCTGCT GATGCTCGAA ATGCTCGAGC CGGTGGAACG CGCGGTGTTT
CTTCTGCGCG AGGCGTTCGA TTATGATTAC GCGGCGATCG CCCGGATCGT GGCGAAGTCG
GAGGCAAACT GCCGCCAGAT GGTCAGTCGC GCAAAAACGC GGCTGCGGGA TCAACCTGCG
CCCGCCGGCC CGCCCAGCGA ACAGGCGCAA GCCGTCGTAC AACGCTTCAT GGCCGCCTGG
GTGGCGGGCG ACCTGCCCGC GCTGCTCCGG TTGCTGAGCG AGGACGTCGT ACTTTACGCG
GACGGCGGTG GGCGCGTGCG CTCGGCGATT CGGCCGATCC ACACGGCAGC TCAGGTGGGC
CAGTTCCTCG TCGAGATTCG CCAGCGCTCC GTCGAAGGCG CCGAATTCTC GCTGGTGTCA
GTCAACGGCG ACGTCGGCGT GTGGATGCGC CGGCCGGATG GGATCGTCAG CGTCACCGCG
TATCGAATCG ACGGCGGGCG GATCCATTCG ATCTACGCCG TCGTGAACCC CGAGAAGCTC
CAGCATGTGG CCGCTCCGCG TCCGGTCGGG TGA
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| Protein sequence | MSEDFHSSRP RLFGIAYRML GSVAEAEDMV QETYLRWQRQ ERTSVEEPAA WLVTTVSRLC
IDELRSARRR REEYVGTWLP EPLLDTSLLA PDQAAARTDS LNLAFLLMLE MLEPVERAVF
LLREAFDYDY AAIARIVAKS EANCRQMVSR AKTRLRDQPA PAGPPSEQAQ AVVQRFMAAW
VAGDLPALLR LLSEDVVLYA DGGGRVRSAI RPIHTAAQVG QFLVEIRQRS VEGAEFSLVS
VNGDVGVWMR RPDGIVSVTA YRIDGGRIHS IYAVVNPEKL QHVAAPRPVG
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