| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3126 |
|---|
| Symbol | |
|---|
| ID | 6207062 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 4067047 |
|---|
| End bp | 4067376 |
|---|
| Gene Length | 330 bp |
|---|
| Protein Length | 109 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641692792 |
|---|
| Product | cytochrome c class I |
|---|
| Protein accession | YP_001820006 |
|---|
| Protein GI | 182414940 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0549907 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCCGA CCCGCACGCT TCTCGTGCTG CTCGCCGCGT TTGTCGCCCC CTCGCTTTTC
GCCGCGGACG CAGCAGCCAT CTGGAAAAAA CAATGCGCCG AGTGCCACGG CAAAGACGGA
CGCGGCGACA CGAAGATCGG CCGGAAACGC TACATCAGTG ATCTCACCAA CCCCGAGCTG
CAGGCCAAAT TTTCCGATGA GCAGGCAGCC CATTCGATCA AGTTCGGACT CAAGGACGCC
AAGGGAAATG TGATCATGGA GCCGGCGCGC CGGGTTTCGG ACCAAGAGGT CGAAGCGCTG
GTCGCATATG TTCGCACGTT GAAGAAGTGA
|
|---|
| Protein sequence | MTPTRTLLVL LAAFVAPSLF AADAAAIWKK QCAECHGKDG RGDTKIGRKR YISDLTNPEL
QAKFSDEQAA HSIKFGLKDA KGNVIMEPAR RVSDQEVEAL VAYVRTLKK
|
|---|
| |