| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3109 |
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| Symbol | |
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| ID | 6204340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 4044617 |
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| End bp | 4045663 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641692774 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001819989 |
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| Protein GI | 182414923 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3507] Beta-xylosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.158232 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGATCA CGCTCCCCGC CGCCATGTCC GTGGCGGCTG AGGCGGGCGA ACCGGCGCTC
ACCACGCCCG GCAAACCGTA CAGCACGAAG TCCGTCTGGG AGTATTCGAA TGTTGGTGAG
CCACCGATTC CTCCCGTCGA GCCTTTGATC GAAGTGGGAT TGCGGGACAC CGCCGTGACT
CGCGGCGCGG ACGGCAACTA TTACATGACC GGTACGATCG GTCCGGATTT CATGACGGCG
AACGAGGGGA TTCCGCTCTG GCGTTCGCCC GACCTGAAAA ACTGGGAGTA TCTCGGGCTC
GTGTGGACTT TTGAACGGGA TGGCACCTGG CAGAAGGAAT GGACCGTGAA GAATGGCGTG
CGCCGCCGCG CCGTCTGGGC GCCGGAGATT CACCACCTGC GCGGCACGTT CTTCATCACC
TACAGCATCA CCGGACTTGG CACCGGCATT CTGCGCAGCA CCACCGGCCG CCCGGAAGGG
CCCTACGTGA GCGCCCATAC GCCGGATGCG CCGCTCACCT CGGGCATCGA TGCTTCGCTT
TTCGTCGAGG ACGATGGCGC CGTCTATTTC GTTTTCGGCA GCGGATACCT GGCTCGGCTC
AAGGATGACT TGAGCGCGCT CGCCGAGGAT CCTGTCCGCC TGCGCTGCAC GCCGGCCGAC
ACCGACATCG AGCATCACCA TCCTGCGCGT CCCTGCCGAA TGGATCAGTT CGACCATGTC
GGCTACGAGG GCGTGTTCCT TTTCAAACGG AACGGACGCT ACTACCTCTC CGGCGCCGAG
CGGTACTACG AGCGCTACCA TTGCATGACG GCGGAGTCGA CGACCTTGCG CGGGCCGTAT
TCCGCTCGCT ACGTGTCGGT GCCGCACGCC GGTCACAACA CGTTCTTTCA GGACCACGAA
GGACGCTGGT GGAGCACGAT GTTCGGCAAC GACCCGCAAG CGCCGATTCA AAAACGTCCG
GGCATTCTTC CTGTGAAATT CGACGCCAAC GGTCATATCG TGCCCGTGGT CGCCGGGCAG
CCATGGACGC CACGAAAGCG AAGCTGA
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| Protein sequence | MLITLPAAMS VAAEAGEPAL TTPGKPYSTK SVWEYSNVGE PPIPPVEPLI EVGLRDTAVT
RGADGNYYMT GTIGPDFMTA NEGIPLWRSP DLKNWEYLGL VWTFERDGTW QKEWTVKNGV
RRRAVWAPEI HHLRGTFFIT YSITGLGTGI LRSTTGRPEG PYVSAHTPDA PLTSGIDASL
FVEDDGAVYF VFGSGYLARL KDDLSALAED PVRLRCTPAD TDIEHHHPAR PCRMDQFDHV
GYEGVFLFKR NGRYYLSGAE RYYERYHCMT AESTTLRGPY SARYVSVPHA GHNTFFQDHE
GRWWSTMFGN DPQAPIQKRP GILPVKFDAN GHIVPVVAGQ PWTPRKRS
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