| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3086 |
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| Symbol | |
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| ID | 6208890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 4020287 |
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| End bp | 4021606 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641692751 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001819966 |
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| Protein GI | 182414900 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.128855 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGACGT TCCGCTACTC CGCCATCAAC GCCGCGACCG GGCGCGAGTG CGCCGGCCGC
ATCGACGGTC GTTCGGCGGA AGACGTTACG CGCACGCTCA AGTCGCGCGG TTTGGCGCCG
ACGTCGCTGA CCTGCATCGA GGAACTCGTC GAAGCGGGAA CGAGGTCGGT TCACGGGCGA
CGGCGGCCCG AGGGCAACGG CTCGGCGGGC ATTCGGCGCG AGCCGGCGGC GGTCGTGGCG
CCCCGTACGA AACGCTGGCG CGGCGTTGCT TTCGGTCGGC CGGTGAGCGC GCGAGCGCTG
GCCTTGTTCA CCCGGCAACT CGCCACGTTG GTGCGTGCGG GCATGCCGCT CGTGCGCGGC
CTCGAGGTGT TGGCGCGACA GGAAAGCGGC CCGCGATTTC GCGAAATCGT GAATGACCTC
GCAGCGACCA TTCGCGCGGG TGAGAGCCTG TCCGAAGCGC TGGCGCAACA TCCACGCGTG
TTCGATCGCC TGTACGTGAG CATGGCGCGG GCAGGCGAGG CGGGCGGGGT GCTCCATGTC
GTGCTGGAAC GTCTGGCGGC GTTCCTCGAG AAGTCGGCGC GACTGAAAGC CCGGATCGCG
GCGGCGATGA CCTACCCGGT GATCGTGCTC GCGCTGGCGG GCGGAATTGT CGCGGCGCTC
ATGGTTTTCG TGGTGCCGCG CTTCGAGCAG ATTTTCAGCG GGCTGCTGAA GGGGCAACCG
CTGCCGACGC TGACGCGCCT GGTGCTCGGT GTGAGCGGAA TTTTTCAACA TCACGGCGGA
TGGTGCCTCG CCCTTGTTGC GATCGGTGTG ATGGCGTTCG CGCTGGTGCG ACGTACCGCA
CGCGGCCGCA GTGCGATCGA CTGGGCAAAG TTGCATTGCC CGGTGGTCGG TCCGCTGTTG
CTCAAGACCG CCATCGCGCG TTTCAGCCGG ACGCTCGGCA CGCTGCTGGC GAGCGGTGTG
CCGATTTTGC AGGCGCTGCT GATCACGCGC GACACGAGCG GCAATACGCA GGTGAGCGCG
GCGATTGCGC TGGTGCACGA ACGCGTCAAA GCCGGAGAGA ATGTGGCCGG GCCGCTGGCC
GCGAGCGGGG TGTTTCCGGC GATGGTCGTC GGACTCGCCG AAGTGGGTGA GGAGACGGGC
AAGCTGCCGG AGATGCTCGG GCGAATCGCT GACGCCTACG AAGAGGAGGT CGACAACGCC
GTCGCGGGTC TCACCGCGAT GATTGAGCCG GTGCTGATTG TGGTGCTCGC GGTGCTGGTG
GGCACGGTCG TGCTGGCGCT GTTCCTGCCG ATCATCTCGG TGATCCAATA TCTGCAGTGA
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| Protein sequence | MPTFRYSAIN AATGRECAGR IDGRSAEDVT RTLKSRGLAP TSLTCIEELV EAGTRSVHGR
RRPEGNGSAG IRREPAAVVA PRTKRWRGVA FGRPVSARAL ALFTRQLATL VRAGMPLVRG
LEVLARQESG PRFREIVNDL AATIRAGESL SEALAQHPRV FDRLYVSMAR AGEAGGVLHV
VLERLAAFLE KSARLKARIA AAMTYPVIVL ALAGGIVAAL MVFVVPRFEQ IFSGLLKGQP
LPTLTRLVLG VSGIFQHHGG WCLALVAIGV MAFALVRRTA RGRSAIDWAK LHCPVVGPLL
LKTAIARFSR TLGTLLASGV PILQALLITR DTSGNTQVSA AIALVHERVK AGENVAGPLA
ASGVFPAMVV GLAEVGEETG KLPEMLGRIA DAYEEEVDNA VAGLTAMIEP VLIVVLAVLV
GTVVLALFLP IISVIQYLQ
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