| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3085 |
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| Symbol | |
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| ID | 6206239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 4018591 |
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| End bp | 4020273 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641692750 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_001819965 |
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| Protein GI | 182414899 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.136067 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGAGA GCCACAATCA GGCGATCGAC GAACTGCTGC GCGGGCCGCT GCAAGTGCCG
GCAGAGCCGA TCGAGGCGTT GCATGAGGCT CACCGCGCCA CCGGCAAATC GCTCGCCGAC
CTTGCGGTCG AACTGGGGGT GGTCGAACGC CGCGAGCTGT TGTCCGCGGT CGGCCGCTCG
CTGGGCTGGC GTTGCGCCGA CGAGTTGCCC GCGACGATCT CGAGCGAGCT GTGCGCTGCG
GTTCCCGCCC GCACTGCGCG CCGGCTGGGG GTGTTCCCGC TGCGGGCACA GGGACACAAT
CTCGAACTGC TGGCGGTGGA CCCGTTCAAC CACCGGCTCG CGGAGGATCT CACCTTCGCG
CTCGAACGGG ACGTGCAGTT GGTCGTCGGG GATCCGACCG CCATTCTGCA TCTCATTCGG
CAGTGCTACG GCGAGGACGA TACCACGCTG GAAGAGGTGC TGCGGGAGTT CGAAGCGGGA
GCGCCGCTTG GTGGAACGAA CGGACTGTCG CAGGATGATC TCGCCGCGCT CGCCGGGCGG
CCACCTGTGG TGCGGTTCGT CGACGTGGTG CTGAGTCAGG CGGTGCGCGC CCACGCGAGT
GACGTTCACT TCGAGCCCTT CGAACACGAG TTCAAGATCC GCTATCGCGT CGACGGCGCG
CTGTACGAAA TGGCTCCGCC GCCCAAGGCG CTGGCTCTCC CGGTCACTTC GCGCCTCAAG
GTGCTGGCCG ACCTGAACAT CGCGGAGCGG AGAGTACCGC AGGATGGTCG CATTCGGCTG
GTGGTGGACG ATCACCCGGT GGATTTGCGC GTGTCGACGC TGCCGACCCA GTTCGGCGAG
AGCGTCGTGT TGCGCGTCTT GGATCGGTCC GCGGTCCATC TCGAACTCGG CGAGTTGGGG
ATGCCCGAGG ATGTGCTCCG TGGAATCACC GGCACGATTC GCCGGCCCAA TGGGATTCTC
GTGGTGACCG GGCCAACCGG CTCGGGCAAA ACCACGACGC TTTACAGTGC GTTGCGGGCG
ATCAACTCGA CCGAACTCAA GCTGCTGACC GCCGAGGACC CGGTGGAATA CGAGATCGAA
GGCATCATGC AGGTGCCGGT GAATCCGGGT ATCGGACTCA GCTTTGCCGC GGCGCTGCGG
AGCTTCCTGC GGCAGGATCC GGACGTCATC CTGGTCGGGG AAATTCGCGA TTTGGAGACA
GCGCAAATGG CAATCCAAGC CTCGCTGACC GGCCACCTGG TGCTTTCAAC GCTGCACACG
AATGACGCGG TGGGCGCGAT CGCCCGGCTG CTCGATCTCG GCGTGGAACC GTTTCTCCTC
GCATCGACGT TGGAAGGCGT GCTCGCGCAG CGGCTCGTGC GGCGAGTGTG TGTGCGGTGT
CGCACGCAGC GCGTTCCCTC GCGTGAGCTT GGCGCGCAAT TGGGCGGATT CGAGAACGAA
CCGCTCTGCG CCGCCGGGCC GGGGTGTGCG GAGTGTGGTG GCACGGGTTA TCGCGGGCGC
CGGGGGATTT TCGAGTGGCT GCGGATCACG GAAGGGCTAC GCGAGATGAT CGTCGCAGGC
GCGCCGAGCC AGGATCTCCG CCGGCAGGCC GTCGCCGGAG GGATGCGGAC GTTGCGGGAG
GACGGGCTGA GAGCGCTGCA GGCCGGGGTG ACGACGATCG AGGAAATCGT GCGCTACACC
TAA
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| Protein sequence | MFESHNQAID ELLRGPLQVP AEPIEALHEA HRATGKSLAD LAVELGVVER RELLSAVGRS
LGWRCADELP ATISSELCAA VPARTARRLG VFPLRAQGHN LELLAVDPFN HRLAEDLTFA
LERDVQLVVG DPTAILHLIR QCYGEDDTTL EEVLREFEAG APLGGTNGLS QDDLAALAGR
PPVVRFVDVV LSQAVRAHAS DVHFEPFEHE FKIRYRVDGA LYEMAPPPKA LALPVTSRLK
VLADLNIAER RVPQDGRIRL VVDDHPVDLR VSTLPTQFGE SVVLRVLDRS AVHLELGELG
MPEDVLRGIT GTIRRPNGIL VVTGPTGSGK TTTLYSALRA INSTELKLLT AEDPVEYEIE
GIMQVPVNPG IGLSFAAALR SFLRQDPDVI LVGEIRDLET AQMAIQASLT GHLVLSTLHT
NDAVGAIARL LDLGVEPFLL ASTLEGVLAQ RLVRRVCVRC RTQRVPSREL GAQLGGFENE
PLCAAGPGCA ECGGTGYRGR RGIFEWLRIT EGLREMIVAG APSQDLRRQA VAGGMRTLRE
DGLRALQAGV TTIEEIVRYT
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