| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3083 |
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| Symbol | |
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| ID | 6207185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 4015687 |
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| End bp | 4017339 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641692748 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_001819963 |
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| Protein GI | 182414897 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02533] general secretory pathway protein E |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0750364 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGAAC GAGGCCTCCT GTCAAAAGCG CAGACCTCCA CCGCGTGTGC GTCCGCCGCA
GCGGTGGAGC GGTTGGCGGG GCAGTTCGGC CTGCCGATCG CGAGACTTTC CGCGGAGGTT
CGGATCGCGC CCGAGGTGCT GGCGCTGGTG CCGCGGGTGT TTGCAGCGCG CCATGGATTG
CTGCCGCTCG CGGCCGACGC GGAGAGTCTG CAGGTCGTGG TGAGTGATCC GCTCGCGACC
GCGGGCGTTG ACGAACTCAG CCAGCAACTC GGTCGTCGCA TCGACATCGC TTTGGCCACG
TCGGCCCAGA TTGCCGAAGC GATCGAACGA TGCTATGGCT CCGCTCCCGC CACGAGCCAC
GGCGAAGATC AACACGACGA ACCCCGCCTC GAAGTCGCCA GCGCCACGCC GACACCGACC
ACGATGACTG CAGGTGGAGC GACGGCGATG GCGGATGACG AGGCCGATGC GCCGATCATC
CGCTTCGTGC AGTCGATCAT TGCGCAGGCG GTGCGGCGCC GAGCCTCGGA TATTCATTGG
GAGCCGCTCG AGCGGCGTTT TCGCGTTCGT TACCGGATCG ACGGGGTGCT GGTCGAAGTG
GAGAACCCGC CCAAGCGACT GCAGCTCGCC GTGGTTTCGC GGATCAAAAT CATGGCGAAC
ATCTCGATCG CCGAGAAACG CCTGCCGCAG GACGGCCGCA TCGCGATCAC GATCGACGGG
CAGGCGCTGG ATTTGCGCGT CTCGACCTTG CCCACGGCGC ATGGCGAAAG CGTGGTCATG
CGGATCCTGG ACAAGGCGAG CCTGCGTCGC GGGCTGCCGG AGCTCGGTTT CGCGGCGGAT
GATCAGGCGC GGTTCGAACG CCTGCTCGCG TTGCCCGATG GGATGGTGCT CGTCACCGGG
CCGACGGGCT CGGGCAAGAC AACGACGCTG TATGCCTGCT TGCAGCGGCT GAACCTGCCG
GATCGCAAAC TCATCACCGT CGAGGACCCA ATCGAGTATC AACTCACCGG CATCAATCAG
GTGCCGGTGC GTCCGGAGGC AGGAGTCACC TTCGCGGCGG CGCTGCGCGC GATCCTGCGG
CAGGCGCCGA ATATCGTCAT GATTGGCGAA ATCCGGGATC TGGAGACAGC GGAGATCGCG
ATCCACGCCG CGCTTACCGG GCACCTGGTG TTTTCGACGT TGCACACCAA CGACGCCGTC
GGCGCGGTGA CCCGGCTGAT CGATCTAGGG GTGAAACCAT TTCTGGTGGC GAGCGCGCTG
CGGGCGGTTT TGGCGCAGCG GCTGGTTCGA AAAACCTGTG AAAAGTGCGC GCACCCGTAT
GAGCCGCCAA CGGCGTTTCT GGCCGCGCTG AACATCCCGC CGGCAGTCGC GTCCGCGGCT
CGCTTCCGCC GCGGGACGGG CTGCCCGGCG TGCCTGCGCA CCGGTTATCG CGGACGGACG
GGCATTTTTG AACTGTTGGA AATCGACGAT GAGCTGCAGC GCCTGATCCA TGCGCGCAGT
CGGACGGCGT TGCTGCGGGC CCATGCGCGT GCCGCCGGCA TGCGAAGCTT GGCCGAGGAC
GGAGCGCGGC AGGCCAGCGC TGGTTTGACC ACCGTCGAGG AAGTCGTCTC GATCACGGTC
GGTGACGCCA GCCAAGGTCC AACCTTCCAA TGA
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| Protein sequence | MPERGLLSKA QTSTACASAA AVERLAGQFG LPIARLSAEV RIAPEVLALV PRVFAARHGL
LPLAADAESL QVVVSDPLAT AGVDELSQQL GRRIDIALAT SAQIAEAIER CYGSAPATSH
GEDQHDEPRL EVASATPTPT TMTAGGATAM ADDEADAPII RFVQSIIAQA VRRRASDIHW
EPLERRFRVR YRIDGVLVEV ENPPKRLQLA VVSRIKIMAN ISIAEKRLPQ DGRIAITIDG
QALDLRVSTL PTAHGESVVM RILDKASLRR GLPELGFAAD DQARFERLLA LPDGMVLVTG
PTGSGKTTTL YACLQRLNLP DRKLITVEDP IEYQLTGINQ VPVRPEAGVT FAAALRAILR
QAPNIVMIGE IRDLETAEIA IHAALTGHLV FSTLHTNDAV GAVTRLIDLG VKPFLVASAL
RAVLAQRLVR KTCEKCAHPY EPPTAFLAAL NIPPAVASAA RFRRGTGCPA CLRTGYRGRT
GIFELLEIDD ELQRLIHARS RTALLRAHAR AAGMRSLAED GARQASAGLT TVEEVVSITV
GDASQGPTFQ
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